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使用显式溶剂网络对依布硒啉及其他有机硒化合物的氧化进行建模。

Modeling the oxidation of ebselen and other organoselenium compounds using explicit solvent networks.

作者信息

Bayse Craig A, Antony Sonia

机构信息

Department of Chemistry and Biochemistry, Old Dominion University, Hampton Boulevard, Norfolk, Virginia 23529, USA.

出版信息

J Phys Chem A. 2009 May 14;113(19):5780-5. doi: 10.1021/jp901880n.

Abstract

The oxidation of dimethylselenide, dimethyldiselenide, S-methylselenenyl-methylmercaptan, and truncated and full models of ebselen (N-phenyl-1,2-benzisoselenazol-3(2H)-one) by methyl hydrogen peroxide has been modeled using density functional theory (DFT) and solvent-assisted proton exchange (SAPE), a method of microsolvation that employs explicit solvent networks to facilitate proton transfer reactions. The calculated activation barriers for these systems were substantially lower in energy (DeltaG(double dagger) + DeltaG(solv) = 13 to 26 kcal/mol) than models that neglect the participation of solvent in proton exchange. The comparison of two- and three-water SAPE networks showed a reduction in the strain in the model system but without a substantial reduction in the activation barriers. Truncating the ebselen model to N-methylisoselenazol-3(2H)-one gave a larger activation barrier than ebselen or N-methyl-1,2-benzisoselenazol-3(2H)-one but provided an efficient means of determining an initial guess for larger transition-state models. The similar barriers obtained for ebselen and Me(2)Se(2) (DeltaG(double dagger) + DeltaG(solv) = 20.65 and 20.40 kcal/mol, respectively) were consistent with experimentally determined rate constants. The activation barrier for MeSeSMe (DeltaG(double dagger) + DeltaG(solv) = 21.25 kcal/mol) was similar to that of ebselen and Me(2)Se(2) despite its significantly lower experimental rate for oxidation of an ebselen selenenyl sulfide by hydrogen peroxide relative to ebselen and ebselen diselenide. The disparity is attributed to intramolecular Se-O interactions, which decrease the nucleophilicity of the selenium center of the selenenyl sulfide.

摘要

利用密度泛函理论(DFT)和溶剂辅助质子交换(SAPE)对二甲基硒、二甲基二硒、S - 甲基硒基 - 甲基硫醇以及依布硒仑(N - 苯基 - 1,2 - 苯并异硒唑 - 3(2H) - 酮)的截短模型和完整模型被甲基过氧化氢氧化的过程进行了模拟,SAPE是一种微溶剂化方法,它采用明确的溶剂网络来促进质子转移反应。这些体系计算得到的活化能垒在能量上(ΔG‡ + ΔGsolv = 13至26 kcal/mol)比忽略溶剂参与质子交换的模型要低得多。二水和三水SAPE网络的比较表明模型体系中的应变有所降低,但活化能垒没有大幅降低。将依布硒仑模型截短为N - 甲基异硒唑 - 3(2H) - 酮得到的活化能垒比依布硒仑或N - 甲基 - 1,2 - 苯并异硒唑 - 3(2H) - 酮更大,但为确定更大过渡态模型的初始猜测提供了一种有效方法。依布硒仑和二甲基二硒得到的相似能垒(分别为ΔG‡ + ΔGsolv = 20.65和20.40 kcal/mol)与实验测定的速率常数一致。尽管相对于依布硒仑和依布硒仑二硒化物,其过氧化氢氧化依布硒仑硒基硫化物的实验速率显著更低,但MeSeSMe的活化能垒(ΔG‡ + ΔGsolv = 21.25 kcal/mol)与依布硒仑和二甲基二硒的相似。这种差异归因于分子内Se - O相互作用,它降低了硒基硫化物中硒中心的亲核性。

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