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计算模型表明,钙离子、三磷酸肌醇和G蛋白偶联模块之间的动态相互作用是盘基网柄菌稳健聚集的关键。

Computational modelling suggests dynamic interactions between Ca2+, IP3 and G protein-coupled modules are key to robust Dictyostelium aggregation.

作者信息

Valeyev Najl V, Kim Jung-Su, Heslop-Harrison J S Pat, Postlethwaite Ian, Kotov Nicolay V, Bates Declan G

机构信息

Systems Biology Lab, Department of Engineering, University of Leicester, University Road, Leicester, UK.

出版信息

Mol Biosyst. 2009 Jun;5(6):612-28. doi: 10.1039/b822074c. Epub 2009 Apr 16.

Abstract

Under conditions of starvation, Dictyostelium cells begin a programme of development during which they aggregate to form a multicellular structure by chemotaxis, guided by propagating waves of cyclic AMP that are relayed robustly from cell to cell. In this paper, we develop and analyse a new model for the intracellular and extracellular cAMP dependent processes that regulate Dictyostelium migration. The model allows, for the first time, a quantitative analysis of the dynamic interactions between calcium, IP(3) and G protein-dependent modules that are shown to be key to the generation of robust cAMP oscillations in Dictyostelium cells. The model provides a mechanistic explanation for the transient increase in cytosolic free Ca(2+) concentration seen in recent experiments with the application of the calmodulin inhibitor calmidazolium (R24571) to Dictyostelium cells, and also allows elucidation of the effects of varying both the conductivity of stretch-activated channels and the concentration of external phosphodiesterase on the oscillatory regime of an individual cell. A rigorous analysis of the robustness of the new model shows that interactions between the different modules significantly reduce the sensitivity of the resulting cAMP oscillations to variations in the kinetics of different Dictyostelium cells, an essential requirement for the generation of the spatially and temporally synchronised chemoattractant cAMP waves that guide Dictyostelium aggregation.

摘要

在饥饿条件下,盘基网柄菌细胞开始发育程序,在此期间它们通过趋化作用聚集形成多细胞结构,由循环腺苷酸(cAMP)的传播波引导,这种波在细胞间稳健地传递。在本文中,我们开发并分析了一种新模型,用于描述调节盘基网柄菌迁移的细胞内和细胞外cAMP依赖性过程。该模型首次允许对钙、肌醇三磷酸(IP(3))和G蛋白依赖性模块之间的动态相互作用进行定量分析,这些模块被证明是盘基网柄菌细胞中产生稳健cAMP振荡的关键。该模型为最近在盘基网柄菌细胞中应用钙调蛋白抑制剂氯咪巴唑(R24571)的实验中观察到的胞质游离钙离子(Ca(2+))浓度的短暂升高提供了一个机制解释,并且还允许阐明拉伸激活通道的电导率和细胞外磷酸二酯酶浓度的变化对单个细胞振荡状态的影响。对新模型稳健性的严格分析表明,不同模块之间的相互作用显著降低了所得cAMP振荡对不同盘基网柄菌细胞动力学变化的敏感性,这是产生引导盘基网柄菌聚集的时空同步趋化因子cAMP波的必要条件。

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