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基于转座子Tn5的链霉菌体内诱变

In vivo Tn5-based transposon mutagenesis of Streptomycetes.

作者信息

Petzke Lutz, Luzhetskyy Andriy

机构信息

Department of Pharmaceutical Biology and Biotechnology, Albert-Ludwigs-University of Freiburg, Germany.

出版信息

Appl Microbiol Biotechnol. 2009 Jul;83(5):979-86. doi: 10.1007/s00253-009-2047-z. Epub 2009 May 29.

Abstract

This paper reports the in vivo expression of the synthetic transposase gene tnp(a) from a hyperactive Tn5 tnp gene mutant in Streptomyces coelicolor. Using the synthetic tnp(a) gene adapted for Streptomyces codon usage, we showed random insertion of the transposon into the Streptomycetes genome. The insertion frequency for the hyperactive Tn5 derivative is 98% of transformed S. coelicolor cells. The random transposition has been confirmed by the recovery of ~1.1% of auxotrophs. The Tn5 insertions are stably inherited in the absence of apramycin selection. The transposon contains an apramycin resistance selection marker and an R6Kgamma origin of replication for transposon rescue. We identified the transposon insertion loci by random sequencing of 14 rescue plasmids. The majority of insertions (12 of 14) were mapped to putative open-reading frames on the S. coelicolor chromosome. These included two new regulatory genes affecting S. coelicolor growth and actinorhodin biosynthesis.

摘要

本文报道了来自天蓝色链霉菌中高活性Tn5转座酶基因(tnp)突变体的合成转座酶基因tnp(a)在体内的表达情况。使用适合链霉菌密码子使用偏好的合成tnp(a)基因,我们证明了转座子能随机插入链霉菌基因组。这种高活性Tn5衍生物的插入频率为98%的转化天蓝色链霉菌细胞。通过约1.1%的营养缺陷型菌株的回救,确认了随机转座。在没有安普霉素选择的情况下,Tn5插入能够稳定遗传。该转座子包含一个安普霉素抗性选择标记和一个用于转座子拯救的R6Kγ复制起始位点。我们通过对14个拯救质粒进行随机测序来确定转座子插入位点。大多数插入(14个中的12个)定位于天蓝色链霉菌染色体上的推定开放阅读框。其中包括两个影响天蓝色链霉菌生长和放线紫红素生物合成的新调控基因。

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