Kocabiyik Semra, Demirok Burçak
Middle East Technical University, Department of Biological Sciences, Ankara, Turkey.
Biotechnol J. 2009 Jul;4(7):1055-65. doi: 10.1002/biot.200800344.
In this study, a gene coding for thermophilic serine protease of the ClpP class from the thermoacidophilic archaeon Thermoplasma volcanium (Tpv) was cloned and expressed in Escherichia coli. The primary sequence and domain analysis of this enzyme showed similarities (50-60% similarity) to signal peptide peptidases (SppA) of bacteria and other archaea. An increase of about tenfold in the activity was achieved by overexpression of Tpv SppA in E. coli, as detected by enzyme assays conducted using Ala-Ala-Phe-pNa and N-Suc-Ala-Ala-Pro-Phe-pNA as substrates. The recombinant enzyme, purified using an anion exchange column chromatography, displayed an apparent molecular mass of 26 kDa on SDS-PAGE analysis. Purified Tpv SppA was active in a broad range of pH and temperature with maximal activity at 60 degrees C and between pH 7.5 and pH 8.0. The activity of the enzyme was strongly inhibited by inhibitors typical for serine proteases, i.e., chymostatin and PMSF. The activity of the Tpv SppA and the stability at high temperature were significantly enhanced in the presence of 5 mM Ca(2+) ions. Our multiple sequence alignment data revealed a conserved Ser/Lys catalytic dyad in Tpv SppA that comprised Ser76 (nucleophile) and Lys128 (general base) residues. A search for a transmembrane domain using automated programs did not predict any signal peptide associated with the Tpv SppA and, therefore, suggested a cytoplasmic location for this enzyme.
在本研究中,编码嗜热嗜酸古菌火山栖热原体(Tpv)的ClpP类嗜热丝氨酸蛋白酶的基因被克隆并在大肠杆菌中表达。对该酶的一级序列和结构域分析表明,它与细菌和其他古菌的信号肽肽酶(SppA)具有相似性(相似性为50 - 60%)。通过在大肠杆菌中过表达Tpv SppA,酶活性提高了约10倍,这是使用丙氨酸 - 丙氨酸 - 苯丙氨酸 - 对硝基苯胺和N - 琥珀酰 - 丙氨酸 - 丙氨酸 - 脯氨酸 - 苯丙氨酸 - 对硝基苯胺作为底物进行酶活性测定检测到的。使用阴离子交换柱色谱法纯化的重组酶,在SDS - PAGE分析中显示出表观分子量为26 kDa。纯化的Tpv SppA在广泛的pH和温度范围内具有活性,在60℃以及pH 7.5至pH 8.0之间具有最大活性。该酶的活性受到丝氨酸蛋白酶典型抑制剂即抑肽酶和苯甲基磺酰氟的强烈抑制。在存在5 mM Ca(2+)离子的情况下,Tpv SppA的活性和高温稳定性显著增强。我们的多序列比对数据揭示了Tpv SppA中保守的丝氨酸/赖氨酸催化二元组,其由Ser76(亲核试剂)和Lys128(通用碱)残基组成。使用自动化程序搜索跨膜结构域未预测到与Tpv SppA相关的任何信号肽,因此表明该酶位于细胞质中。