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羟基烟酸的能量学和结构。2-、4-、6-羟基烟酸和 5-氯-6-羟基烟酸的晶体结构。

Energetics and structure of hydroxynicotinic acids. Crystal structures of 2-, 4-, 6-hydroxynicotinic and 5-chloro-6-hydroxynicotinic acids.

机构信息

Departamento de Química e Bioquímica, Faculdade de Ciências, Universidade de Lisboa, 1649-016 Lisboa, Portugal.

出版信息

J Phys Chem B. 2009 Oct 29;113(43):14291-309. doi: 10.1021/jp906908n.

DOI:10.1021/jp906908n
PMID:19785458
Abstract

The relationship between energetics and structure in 2-, 4-, 5-, and 6-hydroxynicotinic and 5-chloro-6-hydroxynicotinic acids (2HNA, 4HNA, 5HNA, 6HNA, and 5Cl6HNA, respectively) was investigated in the solid and gaseous phases by means of a variety of experimental and computational chemistry techniques. The molecular and crystal structures of the 2HNA, 4HNA, 6HNA, and 5Cl6HNA solid forms used in this study were determined by single crystal X-ray diffraction at 293 +/- 2 K. The 2HNA, 4HNA, and 5Cl6HNA samples were monoclinic (space groups: P2(1)/n for 2HNA and P2(1)/c for 4HNA and 5Cl6HNA), and that of 6HNA was found to be triclinic (space group: P1). The 2HNA sample investigated corresponds to a new polymorphic form of this compound. The 2HNA, 4HNA, 6HNA, and 5Cl6HNA molecules crystallize as oxo tautomers exhibiting N-H and Cring=O bonds. This is also supported by the observation of bands typical of N-H and Cring=O stretching frequencies in the corresponding FT-IR spectra. The absence of these bands in the spectrum of 5HNA indicates that a hydroxy tautomer with an unprotonated N heteroatom and a Cring-OH bond is likely to be present in this case. Results of theoretical calculations carried out at the G3MP2 and CBS-QB3 levels of theory suggest that in the ideal gas phase, at 298.15 K, 2HNA favors the oxo form, 4HNA prefers the hydroxy form, and no strong dominance of one of the two tautomers exists in the case of 6HNA and 5Cl6HNA. The standard molar enthalpies of formation of 2HNA, 4HNA, 5HNA, 6HNA, and 5Cl6HNA in the crystalline state, at 298.15 K, Delta(f)H(m)(o)(cr), were determined by micro combustion calorimetry. The corresponding enthalpies of sublimation, Delta(sub)H(m)(o), were also derived from vapor pressure versus temperature measurements by the Knudsen effusion method. The obtained Delta(f)H(m)(o)(cr) and Delta(sub)H(m)(o) values led to the enthalpies of formation of 2HNA, 4HNA, 5HNA, 6HNA, and 5Cl6HNA in the gaseous phase. These were discussed together with the corresponding predictions by the B3LYP/cc-pVTZ, B3LYP/aug-cc-pVTZ, G3MP2, and CBS-QB3 methods on the basis of isodesmic or atomization reactions. The experimental "stability" order (more stable meaning a more negative Delta(f)H(m)(o)(g) value) found was 5Cl6HNA > 2HNA > 6HNA > 4HNA > 5HNA, and it was accurately captured by the CBS-QB3 and G3MP2 methods, which give 5Cl6HNA > 2HNA approximately 6HNA > 4HNA > 5HNA, irrespective of the use of isodesmic or atomization reactions. In contrast, only when well-balanced isodesmic reactions were considered did the DFT results agree with the experimental ones. The picture that emerged from the structural and energetic studies carried out in this work was also discussed in light of that typical of hydroxypyridines, which are generally regarded as the archetype systems for the study of the hydroxy <--> oxo tautomerization in N-heterocyclic compounds.

摘要

本文采用多种实验和计算化学技术,研究了 2-、4-、5-和 6-羟基烟碱酸(2HNA、4HNA、5HNA、6HNA 和 5Cl6HNA)以及 5-氯-6-羟基烟碱酸(5Cl6HNA)在固态和气相中的能量学与结构之间的关系。在 293 ± 2 K 下通过单晶 X 射线衍射确定了用于本研究的 2HNA、4HNA、6HNA 和 5Cl6HNA 固体形式的分子和晶体结构。2HNA、4HNA 和 5Cl6HNA 样品均为单斜晶系(空间群:2HNA 为 P2(1)/n,4HNA 和 5Cl6HNA 为 P2(1)/c),而 6HNA 为三斜晶系(空间群:P1)。研究的 2HNA 样品对应于该化合物的一种新多晶型形式。2HNA、4HNA、6HNA 和 5Cl6HNA 分子以氧代互变异构体的形式结晶,表现出 N-H 和 Cring=O 键。这也得到了相应的 FT-IR 光谱中典型的 N-H 和 Cring=O 伸缩频率带的观察结果的支持。5HNA 光谱中不存在这些带表明,在这种情况下,可能存在具有未质子化的 N 杂原子和 Cring-OH 键的羟基互变异构体。在 G3MP2 和 CBS-QB3 理论水平上进行的理论计算结果表明,在理想气相中,在 298.15 K 下,2HNA 有利于氧代形式,4HNA 倾向于羟基形式,而在 6HNA 和 5Cl6HNA 的情况下,两种互变异构体之间没有明显的优势。通过微燃烧量热法在 298.15 K 下测定了 2HNA、4HNA、5HNA、6HNA 和 5Cl6HNA 在晶态下的标准摩尔生成焓 Delta(f)H(m)(o)(cr)。还通过 Knudsen 扩散法从蒸气压与温度的测量中推导出相应的升华焓 Delta(sub)H(m)(o)。得到的 Delta(f)H(m)(o)(cr)和 Delta(sub)H(m)(o)值导致了 2HNA、4HNA、5HNA、6HNA 和 5Cl6HNA 在气相中的生成焓。根据等电子或原子化反应,结合 B3LYP/cc-pVTZ、B3LYP/aug-cc-pVTZ、G3MP2 和 CBS-QB3 方法的相应预测,讨论了这些值。实验“稳定性”顺序(更稳定意味着更负的 Delta(f)H(m)(o)(g) 值)为 5Cl6HNA > 2HNA > 6HNA > 4HNA > 5HNA,这与 CBS-QB3 和 G3MP2 方法准确吻合,这两种方法给出了 5Cl6HNA > 2HNA 约 6HNA > 4HNA > 5HNA,无论使用等电子还是原子化反应。相比之下,只有在考虑平衡等电子反应时,DFT 结果才与实验结果一致。本文还讨论了从结构和能量学研究中得出的图像,这与羟吡啶的典型图像一致,羟吡啶通常被认为是 N-杂环化合物中羟基 <--> 氧代互变异构的研究原型系统。

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