Division of Nephrology and Hypertension, Department of Medicine, Oregon Health and Science University, Portland, Oregon 97239, USA.
Physiol Genomics. 2010 Feb 4;40(3):121-7. doi: 10.1152/physiolgenomics.00157.2009. Epub 2009 Dec 8.
Copy number variation (CNV) is increasingly recognized as a source of phenotypic variation among humans. We hypothesized that a CNV in the human arginine vasopressin receptor-2 gene (AVPR2) would be associated with serum sodium concentration based on the following lines of evidence: 1) the protein product of the AVPR2 gene is essential for renal water conservation; 2) mutations in the AVPR2 gene are associated with aberrant water balance in humans; 3) heritability of serum sodium concentration may be greater in females than in males; 4) the AVPR2 gene is X-linked; and 5) a common CNV spanning the AVPR2 gene was recently described in a non-Hispanic Caucasian population. We developed a highly reproducible assay for AVPR2 CNV. Among 279 subjects with measured serum sodium concentration in the Offspring Cohort of the Framingham Heart Study, no subjects exhibited CNV at the AVPR2 locus. Among 517 subjects in the Osteoporotic Fractures in Men Study (MrOS)-including 152 with hyponatremia and 183 with hypernatremia-no subjects with CNV at the AVPR2 locus were identified. CNV at the AVPR2 locus could not be independently confirmed, and CNV at the AVPR2 gene is unlikely to influence systemic water balance on a population-wide basis in non-Hispanic Caucasian subjects. A novel AVPR2 single nucleotide polymorphism affecting the reporter hybridization site gave rise to an artifactually low copy number signal (i.e., less than unity) in one male African American subject. Reanalysis of the original comparative genomic hybridization data revealed bona fide CNVs flanking-but not incorporating-the AVPR2 gene, consistent with our new genotyping data.
拷贝数变异(CNV)越来越被认为是人类表型变异的一个来源。我们假设,人类血管加压素受体 2 基因(AVPR2)的 CNV 会与血清钠浓度相关,这基于以下证据:1)AVPR2 基因的蛋白产物对肾脏保水至关重要;2)AVPR2 基因突变与人类异常的水平衡有关;3)血清钠浓度的遗传率在女性中可能高于男性;4)AVPR2 基因是 X 连锁的;5)最近在非西班牙裔白种人群中描述了一个跨越 AVPR2 基因的常见 CNV。我们开发了一种高度可重复的 AVPR2 CNV 检测方法。在弗雷明汉心脏研究后代队列中,有 279 名测量了血清钠浓度的受试者中,没有一个在 AVPR2 基因座显示 CNV。在骨质疏松性骨折男性研究(MrOS)中,有 517 名受试者,其中 152 名低钠血症,183 名高钠血症,没有一个在 AVPR2 基因座有 CNV。在非西班牙裔白种人群中,AVPR2 基因座的 CNV 无法独立证实,AVPR2 基因的 CNV 不太可能在人群范围内影响全身水平衡。一个新的影响报告杂交位点的 AVPR2 单核苷酸多态性导致一个非洲裔美国男性受试者的拷贝数信号异常低(即小于 1)。对原始比较基因组杂交数据的重新分析显示,AVPR2 基因侧翼的真正的 CNV,但不包括 AVPR2 基因,与我们的新基因分型数据一致。