Computer Architecture Department, University of Malaga, 29071 Málaga, Spain.
Bioinformatics. 2010 Feb 15;26(4):553-9. doi: 10.1093/bioinformatics/btp709. Epub 2010 Jan 3.
Web services technology is becoming the option of choice to deploy bioinformatics tools that are universally available. One of the major strengths of this approach is that it supports machine-to-machine interoperability over a network. However, a weakness of this approach is that various Web Services differ in their definition and invocation protocols, as well as their communication and data formats-and this presents a barrier to service interoperability.
jORCA is a desktop client aimed at facilitating seamless integration of Web Services. It does so by making a uniform representation of the different web resources, supporting scalable service discovery, and automatic composition of workflows. Usability is at the top of the jORCA agenda; thus it is a highly customizable and extensible application that accommodates a broad range of user skills featuring double-click invocation of services in conjunction with advanced execution-control, on the fly data standardization, extensibility of viewer plug-ins, drag-and-drop editing capabilities, plus a file-based browsing style and organization of favourite tools. The integration of bioinformatics Web Services is made easier to support a wider range of users. .
Web 服务技术正成为部署通用生物信息学工具的首选方案。这种方法的主要优势之一是它支持通过网络进行机器对机器的互操作性。然而,这种方法的一个弱点是,各种 Web 服务在其定义和调用协议、以及它们的通信和数据格式方面存在差异,这给服务互操作性带来了障碍。
jORCA 是一个桌面客户端,旨在促进 Web 服务的无缝集成。它通过对不同的 Web 资源进行统一表示、支持可扩展的服务发现以及自动组合工作流程来实现这一点。可用性是 jORCA 的首要任务;因此,它是一个高度可定制和可扩展的应用程序,适用于广泛的用户技能,具有双击调用服务以及高级执行控制、即时数据标准化、查看器插件的可扩展性、拖放编辑功能以及基于文件的浏览样式和常用工具的组织。为了支持更多的用户,生物信息学 Web 服务的集成变得更加容易。