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神经球蛋白蛋白中六配位血红素的非绝热组氨酸离解。

Nonadiabatic histidine dissociation of hexacoordinate heme in neuroglobin protein.

机构信息

Theoretical Chemistry, School of Biotechnology, Royal Institute of Technology, S-10691 Stockholm, Sweden.

出版信息

J Phys Chem A. 2010 Feb 4;114(4):1980-4. doi: 10.1021/jp909887d.

Abstract

In the present work, density functional theory and canonical nonadiabatic Monte Carlo transition state theory have been used to investigate the histidine dissociation process from hexacoordinate heme in Ngb protein. The potential energy surfaces (PES) of the lowest singlet, triplet, and quintet states are calculated by stepwise optimization along with the histidine dissociation pathway. Based on the calculated two-dimensional PES, the histidine dissociation rates for the spin-forbidden processes via singlet to triplet and singlet to quintet transitions have been calculated by the nonadiabatic Monte Carlo transition state theory in canonical ensemble. The present study provides a quantitative description on spin-forbidden histidine dissociation processes.

摘要

在本工作中,我们使用密度泛函理论和正则非绝热蒙特卡罗过渡态理论研究了 Ngb 蛋白中六配位血红素中组氨酸的离解过程。通过沿着组氨酸离解途径逐步优化,计算了最低 singlet、triplet 和 quintet 态的势能面(PES)。基于计算得到的二维 PES,通过非绝热蒙特卡罗过渡态理论在正则系综中计算了自旋禁阻过程通过 singlet 到 triplet 和 singlet 到 quintet 跃迁的组氨酸离解速率。本研究提供了对自旋禁阻组氨酸离解过程的定量描述。

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