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海洋细菌与生物腐蚀现象相关的多相研究的生物多样性分析。

Biodiversity analysis by polyphasic study of marine bacteria associated with biocorrosion phenomena.

机构信息

Equipe de Recherche en Physico-Chimie et Biotechnologies, Université Caen Basse Normandie, Caen Cedex, France.

出版信息

J Appl Microbiol. 2010 Jul;109(1):166-79. doi: 10.1111/j.1365-2672.2009.04643.x. Epub 2009 Nov 30.

Abstract

AIMS

A polyphasic approach was used to study the biodiversity bacteria associated with biocorrosion processes, in particular sulfate-reducing bacteria (SRB) and thiosulfate-reducing bacteria (TRB) which are described to be particularly aggressive towards metallic materials, notably via hydrogen sulfide release.

METHODS AND RESULTS

To study this particular flora, an infrared spectra library of 22 SRB and TRB collection strains were created using a Common Minimum Medium (CMM) developed during this study and standardized culture conditions. The CMM proved its ability to allow for growth of both SRB and TRB strains. These sulfurogen collection strains were clearly discriminated and differentiated at the genus level by fourier transform infrared (FT-IR) spectroscopy. In a second step, infrared spectra of isolates, recovered from biofilms formed on carbon steel coupons immersed for 1 year in three different French harbour areas, were compared to the infrared reference spectra library. In parallel, molecular methods (M13-PCR and 16S rRNA gene sequencing) were used to qualitatively evaluate the intra- and inter-species genetic diversity of biofilm isolates. The biodiversity study indicated that strains belonging to the Vibrio genus were the dominant population; strains belonging to the Desulfovibrio genus (SRB) and Peptostreptococcaceae were also identified.

CONCLUSION

Overall, the combination of the FT-IR spectroscopy and molecular approaches allowed for the taxonomic and ecological study of a bacterial flora, cultivated on CMM, associated with microbiology-induced corrosion (MIC) processes.

SIGNIFICANCE AND IMPACT OF THE STUDY

Via the use of the CMM medium, the culture of marine bacteria (including both SRB and TRB bacteria) was allowed, and the implication of nonsulforogen bacteria in MIC was observed. Their involvement in the biocorrosion phenomena will have to be studied and taken into account in the future.

摘要

目的

采用多相方法研究与生物腐蚀过程相关的细菌多样性,特别是硫酸盐还原菌(SRB)和硫代硫酸盐还原菌(TRB),据报道,这些细菌对金属材料具有特别强的攻击性,特别是通过释放硫化氢。

方法和结果

为了研究这种特殊的菌群,使用在本研究中开发的通用最小培养基(CMM)和标准化培养条件,为 22 株 SRB 和 TRB 收集菌株创建了红外光谱库。CMM 被证明能够允许 SRB 和 TRB 菌株的生长。这些硫生成收集菌株通过傅里叶变换红外(FT-IR)光谱在属水平上得到明确区分和区分。在第二步中,将从浸泡在法国三个不同港口地区的碳钢试片上形成的生物膜中回收的分离物的红外光谱与红外参考光谱库进行比较。同时,使用分子方法(M13-PCR 和 16S rRNA 基因测序)定性评估生物膜分离物的种内和种间遗传多样性。生物多样性研究表明,属于弧菌属的菌株是主要种群;还鉴定了属于脱硫弧菌属(SRB)和消化链球菌科的菌株。

结论

总体而言,FT-IR 光谱和分子方法的结合允许对与微生物诱导腐蚀(MIC)过程相关的在 CMM 上培养的细菌菌群进行分类学和生态学研究。

研究的意义和影响

通过使用 CMM 培养基,允许培养海洋细菌(包括 SRB 和 TRB 细菌),并观察到非硫生成菌在 MIC 中的作用。它们在生物腐蚀现象中的参与将不得不进行研究,并在未来加以考虑。

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