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核苷酸诱导的 DnaK 构象态的能量学。

Energetics of nucleotide-induced DnaK conformational states.

机构信息

Unidad de Biofsica (CSIC/UPV-EHU) y Departamento de Bioquímica y Biología Molecular, Facultad de Ciencia y Tecnología, Universidad del País Vasco, Apartado 644, 48080 Bilbao, Spain.

出版信息

Biochemistry. 2010 Feb 16;49(6):1338-45. doi: 10.1021/bi901847q.

Abstract

Hsp70 chaperones are molecular switches that use the free energy of ATP binding and hydrolysis to modulate their affinity for protein substrates and, most likely, to remodel non-native interactions allowing proper substrate folding. By means of isothermal titration calorimetry, we have measured the thermodynamics of ATP and ADP binding to (i) wild-type DnaK, the main bacterial Hsp70; (ii) two single-point mutants, DnaK(T199A), which lacks ATPase activity but maintains conformational changes similar to those observed in the wild-type protein, and DnaK(R151A), defective in interdomain communication; and iii) two deletion mutants, the isolated nucleotide binding domain (K-NBD) and a DeltaLid construct [DnaK(1-507)]. At 25 degrees C, ATP binding to DnaK results in a fast endothermic and a slow exothermic process due to ATP hydrolysis. We demonstrate that the endothermic event is due to the allosteric coupling between ATP binding to the nucleotide binding domain and the conformational rearrangement of the substrate binding domain. The interpretation of our data is compatible with domain docking upon ATP binding and shows that this conformational change carries an energy penalty of ca. 1 kcal/mol. The conformational energy stored in the ATP-bound DnaK state, together with the free energy of ATP hydrolysis, can be used in remodeling bound substrates.

摘要

Hsp70 伴侣蛋白是分子开关,它们利用 ATP 结合和解离的自由能来调节其与蛋白质底物的亲和力,并且很可能重塑非天然相互作用,从而允许适当的底物折叠。通过等温滴定量热法,我们已经测量了(i)野生型 DnaK,即主要的细菌 Hsp70;(ii)两个单点突变体,DnaK(T199A),其缺乏 ATP 酶活性,但保持与野生型蛋白中观察到的相似的构象变化,和 DnaK(R151A),在域间通讯中存在缺陷;以及(iii)两个缺失突变体,分离的核苷酸结合域(K-NBD)和一个 DeltaLid 构建体 [DnaK(1-507)]。在 25 摄氏度下,ATP 与 DnaK 的结合导致快速的吸热和缓慢的放热过程,这是由于 ATP 的水解。我们证明,吸热事件是由于核苷酸结合域与底物结合域的构象重排之间的变构偶联。我们的数据解释与 ATP 结合时的结构域对接兼容,并表明这种构象变化带有约 1 千卡/摩尔的能量代价。与 ATP 结合的 DnaK 状态中储存的构象能量,以及 ATP 水解的自由能,可以用于重塑结合的底物。

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