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对 79 例生长受限患者进行甲基化分析,揭示印迹基因座甲基化改变的新图谱。

Methylation analysis of 79 patients with growth restriction reveals novel patterns of methylation change at imprinted loci.

机构信息

Academic Unit of Genetic Medicine, School of Medicine, University of Southampton, Princess Anne Hospital, Southampton, UK.

出版信息

Eur J Hum Genet. 2010 Jun;18(6):648-55. doi: 10.1038/ejhg.2009.246. Epub 2010 Jan 27.

DOI:10.1038/ejhg.2009.246
PMID:20104244
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2987339/
Abstract

This study was an investigation of 79 patients referred to the Wessex Regional Genetics Laboratory with suspected Russell-Silver Syndrome or unexplained short stature/intra uterine growth restriction, warranting genetic investigation. Methylation status was analysed at target sequences within eleven imprinted loci (PLAGL1, IGF2R, PEG10, MEST1, GRB10, KCNQ1OT1, H19, IGF2P0, DLK1, PEG3, NESPAS). Thirty seven percent (37%) (29 of 79) of samples were shown to have a methylation abnormality. The commonest finding was a loss of methylation at H19 (23 of 29), as previously reported in Russell-Silver Syndrome. In addition, four of these patients had methylation anomalies at other loci, of whom two showed hypomethylation of multiple imprinted loci, and two showed a complete gain of methylation at IGF2R. This latter finding was also present in five other patients who did not have demonstrable changes at H19. In total, 7 of 79 patients showed a gain of methylation at IGF2R and this was significantly different from a normal control population of 267 individuals (P=0.002). This study in patients with growth restriction shows the importance of widening the epigenetic investigation to include multiple imprinted loci and highlights potential involvement of the IGF2R locus.

摘要

这项研究调查了 79 名被转介到威塞克斯地区遗传学实验室的患者,这些患者疑似患有 Russell-Silver 综合征或原因不明的身材矮小/宫内生长受限,需要进行基因检查。在 11 个印迹基因座(PLAGL1、IGF2R、PEG10、MEST1、GRB10、KCNQ1OT1、H19、IGF2P0、DLK1、PEG3、NESPAS)内的目标序列分析了甲基化状态。结果显示,37%(79 例中的 29 例)的样本存在甲基化异常。最常见的发现是 H19 失去甲基化(29 例中的 23 例),如先前在 Russell-Silver 综合征中报道的那样。此外,其中 4 名患者在其他基因座存在甲基化异常,其中 2 名患者多个印迹基因座呈低甲基化,2 名患者 IGF2R 呈完全甲基化获得。另外 5 名患者也存在 IGF2R 完全甲基化获得的情况,而 H19 没有明显变化。总共有 7 例患者 IGF2R 获得甲基化,与 267 例正常对照人群相比差异有统计学意义(P=0.002)。这项对生长受限患者的研究表明,扩大表观遗传学检查范围,包括多个印迹基因座的重要性,并强调了 IGF2R 基因座的潜在参与。

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本文引用的文献

1
Multilocus methylation analysis in a large cohort of 11p15-related foetal growth disorders (Russell Silver and Beckwith Wiedemann syndromes) reveals simultaneous loss of methylation at paternal and maternal imprinted loci.多基因甲基化分析在一个大的 11p15 相关胎儿生长障碍队列(Russell-Silver 和 Beckwith-Wiedemann 综合征)中揭示了父系和母系印迹基因座同时失去甲基化。
Hum Mol Genet. 2009 Dec 15;18(24):4724-33. doi: 10.1093/hmg/ddp435. Epub 2009 Sep 14.
2
Lessons from BWS twins: complex maternal and paternal hypomethylation and a common source of haematopoietic stem cells.BWS 双胞胎的启示:复杂的母体和父体低甲基化以及共同的造血干细胞来源。
Eur J Hum Genet. 2009 Dec;17(12):1625-34. doi: 10.1038/ejhg.2009.77. Epub 2009 Jun 10.
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Abnormal methylation at the KvDMR1 imprinting control region in clinically normal children conceived by assisted reproductive technologies.通过辅助生殖技术受孕的临床正常儿童中,KvDMR1印记控制区域存在异常甲基化。
Mol Hum Reprod. 2009 Aug;15(8):471-7. doi: 10.1093/molehr/gap038. Epub 2009 Jun 3.
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Broad clinical spectrum in Silver-Russell syndrome and consequences for genetic testing in growth retardation.Silver-Russell综合征的广泛临床谱及其对生长迟缓基因检测的影响。
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