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肿瘤坏死因子基因的转录调控

Transcriptional control of the TNF gene.

作者信息

Falvo James V, Tsytsykova Alla V, Goldfeld Anne E

机构信息

Immune Disease Institute and Harvard Medical School, 200 Longwood Avenue, Boston, MA 02115, USA.

出版信息

Curr Dir Autoimmun. 2010;11:27-60. doi: 10.1159/000289196. Epub 2010 Feb 18.


DOI:10.1159/000289196
PMID:20173386
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4785889/
Abstract

The cytokine TNF is a critical mediator of immune and inflammatory responses. The TNF gene is an immediate early gene, rapidly transcribed in a variety of cell types following exposure to a broad range of pathogens and signals of inflammation and stress. Regulation of TNF gene expression at the transcriptional level is cell type- and stimulus-specific, involving the recruitment of distinct sets of transcription factors to a compact and modular promoter region. In this review, we describe our current understanding of the mechanisms through which TNF transcription is specifically activated by a variety of extracellular stimuli in multiple cell types, including T cells, B cells, macrophages, mast cells, dendritic cells, and fibroblasts. We discuss the role of nuclear factor of activated T cells and other transcription factors and coactivators in enhanceosome formation, as well as the contradictory evidence for a role for nuclear factor kappaB as a classical activator of the TNF gene. We describe the impact of evolutionarily conserved cis-regulatory DNA motifs in the TNF locus upon TNF gene transcription, in contrast to the neutral effect of single nucleotide polymorphisms. We also assess the regulatory role of chromatin organization, epigenetic modifications, and long-range chromosomal interactions at the TNF locus.

摘要

细胞因子TNF是免疫和炎症反应的关键介质。TNF基因是一个即时早期基因,在暴露于多种病原体以及炎症和应激信号后,能在多种细胞类型中迅速转录。TNF基因在转录水平的表达调控具有细胞类型和刺激特异性,涉及将不同的转录因子募集到一个紧凑的模块化启动子区域。在本综述中,我们阐述了目前对多种细胞类型(包括T细胞、B细胞、巨噬细胞、肥大细胞、树突状细胞和成纤维细胞)中多种细胞外刺激特异性激活TNF转录机制的理解。我们讨论了活化T细胞核因子及其他转录因子和共激活因子在增强体形成中的作用,以及核因子κB作为TNF基因经典激活剂作用的矛盾证据。与单核苷酸多态性的中性作用相反,我们描述了TNF基因座中进化保守的顺式调控DNA基序对TNF基因转录的影响。我们还评估了TNF基因座处染色质组织、表观遗传修饰和长程染色体相互作用的调控作用。

相似文献

[1]
Transcriptional control of the TNF gene.

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本文引用的文献

[1]
Differential role for c-Rel and C/EBPbeta/delta in TLR-mediated induction of proinflammatory cytokines.

J Immunol. 2009-6-1

[2]
Linking DNA methylation and histone modification: patterns and paradigms.

Nat Rev Genet. 2009-5

[3]
Regulation and function of NF-kappaB transcription factors in the immune system.

Annu Rev Immunol. 2009

[4]
A dimer-specific function of the transcription factor NFATp.

Proc Natl Acad Sci U S A. 2008-12-16

[5]
Cytokine and cytokine receptor gene polymorphisms and their functionality.

Cytokine Growth Factor Rev. 2009-2

[6]
G9a and HP1 couple histone and DNA methylation to TNFalpha transcription silencing during endotoxin tolerance.

J Biol Chem. 2008-11-21

[7]
IFN-gamma-induced TNF-alpha expression is regulated by interferon regulatory factors 1 and 8 in mouse macrophages.

J Immunol. 2008-10-1

[8]
TRAF6 specifically contributes to FcepsilonRI-mediated cytokine production but not mast cell degranulation.

J Biol Chem. 2008-11-14

[9]
TRIF and IRF-3 binding to the TNF promoter results in macrophage TNF dysregulation and steatosis induced by chronic ethanol.

J Immunol. 2008-9-1

[10]
Chromatin profiling across the human tumour necrosis factor gene locus reveals a complex, cell type-specific landscape with novel regulatory elements.

Nucleic Acids Res. 2008-9

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