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类风湿关节炎患者中TNFRSF14与TNFRSF6B基因多态性之间的上位性证据。

Evidence of epistasis between TNFRSF14 and TNFRSF6B polymorphisms in patients with rheumatoid arthritis.

作者信息

Perdigones Nieves, Vigo Ana G, Lamas José R, Martínez Alfonso, Balsa Alejandro, Pascual-Salcedo Dora, de la Concha Emilio G, Fernández-Gutiérrez Benjamín, Urcelay Elena

机构信息

Immunology Department, Hospital Clínico San Carlos, C/Profesor Martín Lagos, s/n 28040 Madrid, Spain.

出版信息

Arthritis Rheum. 2010 Mar;62(3):705-10. doi: 10.1002/art.27292.

Abstract

OBJECTIVE

Genetic variants located close to 2 genes codifying for members of the tumor necrosis factor receptor superfamily (TNFRSF), TNFRSF14 and TNFRSF6B, have recently been associated with rheumatoid arthritis (RA) and with inflammatory bowel disease susceptibility, respectively. The TNFRSF6B protein has been related to osteoclastic activity, apoptosis inhibition, and modulation of T cell activation and differentiation. Interestingly, peptides encoded by both genes bind a common ligand called LIGHT, which is overexpressed in RA synovium. The aim of this study was to investigate the combined effect of the TNFRSF14 rs6684865 and TNFRSF6B rs4809330 polymorphisms in RA predisposition.

METHODS

TaqMan genotyping of these polymorphisms was conducted in 649 patients with RA and 553 ethnically matched control subjects (first study). To validate the results, an independent replication cohort with 211 patients and 255 control subjects was additionally studied (replication study).

RESULTS

The frequency of the rs6684865 G allele in the RA subgroup with the rs4809330 GG susceptibility genotype was significantly higher than that in the other patients with RA (74% versus 65%; P = 0.002) or in control subjects (74% versus 67%; P = 0.003). Because no significant differences between the control and patient groups in the first and replication studies were observed, the data were pooled. When compared with control subjects overall, the effect of the rs6684865 G allele in the group with the rs4809330 GG genotype (odds ratio [OR] 1.49) was significantly different from the effect observed in the group carrying the rs4809330 A allele (OR 0.97; P = 0.0015 by Breslow-Day test of homogeneity).

CONCLUSION

We have identified and replicated a novel gene-gene interaction between 2 polymorphisms of TNFRSF members in Spanish patients with RA, based on the hypothesis of shared pathogenic pathways in complex diseases.

摘要

目的

位于编码肿瘤坏死因子受体超家族(TNFRSF)成员的两个基因(TNFRSF14和TNFRSF6B)附近的基因变异,最近分别与类风湿关节炎(RA)和炎症性肠病易感性相关。TNFRSF6B蛋白与破骨细胞活性、细胞凋亡抑制以及T细胞活化和分化的调节有关。有趣的是,这两个基因编码的肽都能结合一种名为LIGHT的共同配体,该配体在RA滑膜中过表达。本研究的目的是探讨TNFRSF14 rs6684865和TNFRSF6B rs4809330多态性在RA易感性中的联合作用。

方法

对649例RA患者和553例种族匹配的对照受试者进行了这些多态性的TaqMan基因分型(第一项研究)。为了验证结果,还对一个由211例患者和255例对照受试者组成的独立复制队列进行了研究(复制研究)。

结果

具有rs4809330 GG易感基因型的RA亚组中rs6684865 G等位基因的频率显著高于其他RA患者(74%对65%;P = 0.002)或对照受试者(74%对67%;P = 0.003)。由于在第一项研究和复制研究中未观察到对照组和患者组之间的显著差异,因此将数据合并。与总体对照受试者相比,rs6684865 G等位基因在rs4809330 GG基因型组中的作用(优势比[OR]1.49)与携带rs4809330 A等位基因组中观察到的作用(OR 0.97;通过Breslow-Day齐性检验,P = 0.0015)显著不同。

结论

基于复杂疾病中共同致病途径的假设,我们在西班牙RA患者中鉴定并复制了TNFRSF成员的两个多态性之间的一种新的基因-基因相互作用。

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