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在一个大型多代扩展家族中对骨关节炎定量生物标志物性状进行全基因组连锁分析。

Genome-wide linkage analysis of quantitative biomarker traits of osteoarthritis in a large, multigenerational extended family.

作者信息

Chen Hsiang-Cheng, Kraus Virginia Byers, Li Yi-Ju, Nelson Sarah, Haynes Carol, Johnson Jessica, Stabler Thomas, Hauser Elizabeth R, Gregory Simon G, Kraus William E, Shah Svati H

机构信息

Duke University Medical Center, Durham, NC 27710, USA.

出版信息

Arthritis Rheum. 2010 Mar;62(3):781-90. doi: 10.1002/art.27288.

Abstract

OBJECTIVE

The genetic contributions to the multifactorial disorder osteoarthritis (OA) have been increasingly recognized. The goal of the current study was to use OA-related biomarkers of severity and disease burden as quantitative traits to identify genetic susceptibility loci for OA.

METHODS

In a large multigenerational extended family (n = 350), we measured 5 OA-related biomarkers: hyaluronan (HA), cartilage oligomeric matrix protein (COMP), N-propeptide of type IIA collagen (PIIANP), C-propeptide of type II procollagen (CPII), and type II collagen neoepitope (C2C). Single-nucleotide polymorphism markers (n = 6,090) covering the whole genome were genotyped using the Illumina HumanLinkage-12 BeadChip. Variance components analysis, as implemented in the Sequential Oligogenic Linkage Analysis Routines, was used to estimate heritabilities of the quantitative traits and to calculate 2-point and multipoint logarithm of odds (LOD) scores using a polygenic model.

RESULTS

After adjusting for age and sex, we found that 4 of the 5 biomarkers exhibited significant heritability (PIIANP 0.57, HA 0.49, COMP 0.43, C2C 0.30; P < or = 0.01 for all). Fourteen of the 19 loci that had multipoint LOD scores of >1.5 were near to or overlapped with previously reported OA susceptibility loci. Four of these loci were identified by more than 1 biomarker. The maximum multipoint LOD scores for the heritable quantitative biomarker traits were 4.3 for PIIANP (chromosome 8p23.2), 3.2 for COMP (chromosome 8q11.1), 2.0 for HA (chromosome 6q16.3), and 2.0 for C2C (chromosome 5q31.2).

CONCLUSION

Herein, we report the first evidence of genetic susceptibility loci identified by OA-related biomarkers in an extended family. Our results demonstrate that serum concentrations of PIIANP, HA, COMP, and C2C have substantial heritable components, and using these biomarkers, several genetic loci potentially contributing to the genetic diversity of OA were identified.

摘要

目的

遗传因素对多因素疾病骨关节炎(OA)的影响已得到越来越多的认识。本研究的目的是使用与OA严重程度和疾病负担相关的生物标志物作为数量性状,以确定OA的遗传易感性位点。

方法

在一个大型多代大家庭(n = 350)中,我们测量了5种与OA相关的生物标志物:透明质酸(HA)、软骨寡聚基质蛋白(COMP)、IIA型胶原N端前肽(PIIANP)、II型前胶原C端前肽(CPII)和II型胶原新表位(C2C)。使用Illumina HumanLinkage-12 BeadChip对覆盖全基因组的单核苷酸多态性标记(n = 6,090)进行基因分型。采用顺序寡基因连锁分析程序中实施的方差成分分析来估计数量性状的遗传力,并使用多基因模型计算两点和多点对数优势(LOD)分数。

结果

在调整年龄和性别后,我们发现5种生物标志物中有4种表现出显著的遗传力(PIIANP为0.57,HA为0.49,COMP为0.43,C2C为0.30;所有P均≤0.01)。19个多点LOD分数>1.5的位点中有14个与先前报道的OA易感位点接近或重叠。其中4个位点由不止一种生物标志物鉴定出来。可遗传的数量生物标志物性状的最大多点LOD分数分别为:PIIANP(8号染色体p23.2)为4.3,COMP(8号染色体q11.1)为3.2,HA(6号染色体q16.3)为2.0,C2C(5号染色体q31.2)为2.0。

结论

在此,我们报告了在一个大家庭中通过与OA相关的生物标志物鉴定出遗传易感性位点的首个证据。我们的结果表明,PIIANP、HA、COMP和C2C的血清浓度具有显著的遗传成分,并且使用这些生物标志物,鉴定出了几个可能导致OA遗传多样性的基因位点。

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