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甲藻门三角褐指藻中的肌球蛋白多样性。

Myosin diversity in the diatom Phaeodactylum tricornutum.

机构信息

Program in Cell Biology and Biochemistry, Department of Biology, Bucknell University, Lewisburg, PA 17837, USA.

出版信息

Cytoskeleton (Hoboken). 2010 Mar;67(3):142-51. doi: 10.1002/cm.20431.

Abstract

This report describes the domain architecture of ten myosins cloned from the pennate diatom Phaeodactylum tricornutum. Several of the P. tricornutum myosins show similarity to myosins from the centric diatom Thalassiosira pseudonana as well as to one myosin from the oomycete Phytophthora ramorum. The P. tricornutum myosins, ranging in size from 126 kDa to over 250 kDa, all possess the canonical head, neck and tail domains common to most myosins, though variations in each of these domains is evident. Among the features distinguishing several of the diatom myosin head domains are N-terminal SH3-like domains, variations in or near the P-loop and Loop 1 regions close to the nucleotide binding pocket, and extended converter domains. Variations in the length of the neck domain or lever arm, defined by the light chain-binding IQ motifs, are apparent with the different diatom myosins predicted to contain from one to nine IQ motifs. Protein domains found within the P. tricornutum myosin tails include regions of coiled-coil structure, ankyrin repeats, CBS domain pairs, a PB1 domain, a kinase domain and a FYVE-finger motif. As many of these features have never before been characterized in myosins of any type, it is likely that these new diatom myosins will expand the repertoire of known myosin behaviors.

摘要

本报告描述了从羽纹硅藻菱形藻中克隆的十种肌球蛋白的结构域架构。几种菱形藻肌球蛋白与中心硅藻假交替单胞藻的肌球蛋白以及卵菌疫霉的一种肌球蛋白具有相似性。菱形藻肌球蛋白的大小从 126 kDa 到 250 kDa 以上不等,都具有大多数肌球蛋白共有的典型头部、颈部和尾部结构域,但每个结构域都存在明显的变化。在区分几种硅藻肌球蛋白头部结构域的特征中,有 N 端 SH3 样结构域、靠近核苷酸结合口袋的 P 环和 Loop 1 区域中的变化或附近的变化,以及扩展的转换器结构域。不同的硅藻肌球蛋白预测包含一个到九个 IQ 基序,颈部结构域或杠杆臂的长度变化是明显的。在菱形藻肌球蛋白尾部发现的蛋白结构域包括卷曲螺旋结构域、锚蛋白重复序列、CBS 结构域对、PB1 结构域、激酶结构域和 FYVE 指状结构域。由于这些特征中的许多以前从未在任何类型的肌球蛋白中被描述过,因此这些新的硅藻肌球蛋白很可能会扩展已知肌球蛋白行为的范围。

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