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技术说明:PCR 分析古代 DNA 的最小目标量。

Technical note: PCR analysis of minimum target amount of ancient DNA.

机构信息

Helmholtz Zentrum Munich, Institute of Radiation Protection, 85764 Neuherberg, Germany.

出版信息

Am J Phys Anthropol. 2010 Jun;142(2):321-7. doi: 10.1002/ajpa.21268.

Abstract

The study of ancient DNA plays an important role in archaeological and palaeontological research as well as in pathology and forensics. Here, we present a new tool for ancient DNA analysis, which overcomes contamination problems, DNA degradation, and the negative effects of PCR inhibitors while reducing the amount of starting target material in the picogram range. Ancient bone samples from four Egyptian mummies were examined by combining laser microdissection, conventional DNA extraction, and low-volume PCR. Initially, several bone particles (osteons) in the micrometer range were extracted by laser microdissection. Subsequently, ancient DNA amplification was performed to verify our extraction method. Amelogenin and beta-actin gene specific fragments were amplified via low-volume PCR in a total reaction volume of 1 microl. Results of microdissected mummy DNA samples were compared to mummy DNA, which was extracted using a standard DNA extraction method based on pulverization of bone material. Our results highlight the combination of laser microdissection and low-volume PCR as a promising new technique in ancient DNA analysis.

摘要

古 DNA 研究在考古学和古生物学研究以及病理学和法医学中都起着重要的作用。在这里,我们提出了一种新的古 DNA 分析工具,它克服了污染问题、DNA 降解以及 PCR 抑制剂的负面影响,同时减少了起始目标材料在皮克级范围内的量。通过结合激光微切割、常规 DNA 提取和低体积 PCR,对来自四个埃及木乃伊的古代骨骼样本进行了检查。最初,通过激光微切割提取了几毫米范围内的几个骨颗粒(骨单位)。随后,通过低体积 PCR 进行了古 DNA 扩增,以验证我们的提取方法。通过低体积 PCR 在 1 微升的总反应体积中扩增了 amelogenin 和 beta-actin 基因的特异性片段。微切割木乃伊 DNA 样本的结果与使用基于骨材料粉碎的标准 DNA 提取方法提取的木乃伊 DNA 进行了比较。我们的结果突出了激光微切割和低体积 PCR 的结合作为古 DNA 分析中的一种有前途的新技术。

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