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静水压力对鼠伤寒沙门氏菌色氨酸合酶构象平衡的影响。

Effects of hydrostatic pressure on the conformational equilibrium of tryptophan synthase from Salmonella typhimurium.

机构信息

Department of Chemistry, University of Georgia, Athens, 30602, USA.

出版信息

Ann N Y Acad Sci. 2010 Feb;1189:95-103. doi: 10.1111/j.1749-6632.2009.05201.x.

Abstract

A wide range of parameters influence allosteric communications between the alpha- and beta-subunits of the Trp synthase alpha(2)beta(2) multienzyme complex with L-Ser, including monovalent cations, pH, temperature, ligands, organic solvents, and hydrostatic pressure. The conformational change from closed to open can be monitored either by absorbance at 423 nm or fluorescence at 495 nm from the pyridoxal-5'-phosphate-L-Ser complex. Pressure perturbation was used to quantify the effects of monovalent cations, ligands, and mutations on the conformational equilibrium of Trp synthase. P-jump kinetics in the presence of Na(+), NH(4) (+), and Na(+) together with benzimidazole were also examined. The plots of lnk versus P are nonlinear and require a compressibility (beta(double dagger) (o)) term to obtain a good fit. beta(double dagger) (o) is positive for the Na(+) enzyme but negative for NH(4) (+) and Na(+) with benzimidazole. These results suggest that there is a large contribution of solvation to the kinetics of the conformational change of Trp synthase. The relaxation kinetics are also different if the P-jumps are made by increasing or decreasing pressure, suggesting that the enzyme conformations are ensembles of microstates.

摘要

一系列参数影响色氨酸合酶 α(2)β(2)多酶复合物与 L-丝氨酸之间的变构通讯,包括单价阳离子、pH 值、温度、配体、有机溶剂和静水压力。从闭合到开放的构象变化可以通过 423nm 处的吸光度或 495nm 处的荧光从吡哆醛-5'-磷酸-L-丝氨酸复合物监测。压力微扰用于定量单价阳离子、配体和突变对色氨酸合酶构象平衡的影响。还检查了存在 Na(+)、NH(4) (+)和 Na(+)与苯并咪唑时的 P-jump 动力学。lnk 对 P 的图是非线性的,需要压缩性(β(double dagger) (o))项才能获得良好的拟合。β(double dagger) (o)对于 Na(+)酶为正,但对于 NH(4) (+)和 Na(+)与苯并咪唑为负。这些结果表明,色氨酸合酶构象变化的动力学中有很大一部分是溶剂化的贡献。如果通过增加或降低压力进行 P-jump,则弛豫动力学也不同,这表明酶构象是微态的集合。

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Structure and mechanistic implications of a tryptophan synthase quinonoid intermediate.
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Control of ionizable residues in the catalytic mechanism of tryptophan synthase from Salmonella typhimurium.
Biochemistry. 2007 Nov 13;46(45):13223-34. doi: 10.1021/bi701152f. Epub 2007 Oct 10.
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Synthesis and characterization of allosteric probes of substrate channeling in the tryptophan synthase bienzyme complex.
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The scope of moderate pressure changes for kinetic and equilibrium studies of biochemical systems.
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