Suppr超能文献

磷酸二酯酶 6 抑制作用的决定因素。

Determinants for phosphodiesterase 6 inhibition by its gamma-subunit.

机构信息

Department of Molecular Physiology and Biophysics, University of Iowa Carver College of Medicine, Iowa City, Iowa 52242, USA.

出版信息

Biochemistry. 2010 May 11;49(18):3862-7. doi: 10.1021/bi100354a.

Abstract

The interaction of phosphodiesterase 6 (PDE6) with its inhibitory Pgamma-subunits (Pgamma) is unparalleled among PDE families and is central to vertebrate phototransduction. The C-terminus of Pgamma occludes the active site of PDE6, thereby preventing hydrolysis of cGMP. In this study, we examine the determinants of this critical interaction using structure-based loss-of-function mutagenesis of a chimeric PDE5/PDE6 catalytic domain and gain-of-function mutagenesis of the PDE5 catalytic domain. This analysis revealed the key role of PDE6-specific residues within the catalytic domain M-loop-alpha-helix 15 region and suggested an important contribution of the H-loop-M-loop interface to the PDE6 inhibition by the Pgamma C-terminus. Identification of the determinants for the PDE6-Pgamma interaction offers insights into the evolution of the visual effector enzyme.

摘要

磷酸二酯酶 6(PDE6)与其抑制性 Pγ-亚基(Pγ)的相互作用在 PDE 家族中是无与伦比的,是脊椎动物光转导的核心。Pγ 的 C 端封闭了 PDE6 的活性位点,从而阻止 cGMP 的水解。在这项研究中,我们使用嵌合 PDE5/PDE6 催化结构域的基于结构的功能丧失突变和 PDE5 催化结构域的功能获得性突变来研究这种关键相互作用的决定因素。该分析揭示了催化结构域 M 环-α螺旋 15 区域中 PDE6 特异性残基的关键作用,并表明 H 环-M 环界面对于 Pγ C 端抑制 PDE6 的重要贡献。确定 PDE6-Pγ 相互作用的决定因素为视觉效应酶的进化提供了线索。

相似文献

1
Determinants for phosphodiesterase 6 inhibition by its gamma-subunit.
Biochemistry. 2010 May 11;49(18):3862-7. doi: 10.1021/bi100354a.
2
Structural basis of phosphodiesterase 6 inhibition by the C-terminal region of the gamma-subunit.
EMBO J. 2009 Nov 18;28(22):3613-22. doi: 10.1038/emboj.2009.284. Epub 2009 Oct 1.
3
Partial reconstitution of photoreceptor cGMP phosphodiesterase characteristics in cGMP phosphodiesterase-5.
J Biol Chem. 2001 Jun 15;276(24):21698-703. doi: 10.1074/jbc.M100626200. Epub 2001 Apr 2.
7
Structural Analysis of the Regulatory GAF Domains of cGMP Phosphodiesterase Elucidates the Allosteric Communication Pathway.
J Mol Biol. 2020 Oct 2;432(21):5765-5783. doi: 10.1016/j.jmb.2020.08.026. Epub 2020 Sep 6.
10
Direct allosteric regulation between the GAF domain and catalytic domain of photoreceptor phosphodiesterase PDE6.
J Biol Chem. 2008 Oct 31;283(44):29699-705. doi: 10.1074/jbc.M803948200. Epub 2008 Sep 8.

引用本文的文献

1
Mechanism investigation of highly selective inhibitors toward phosphodiesterase 5 and 6 via the calculation and simulation.
Front Chem. 2024 Aug 8;12:1400886. doi: 10.3389/fchem.2024.1400886. eCollection 2024.
5
Evolution of Vertebrate Phototransduction: Cascade Activation.
Mol Biol Evol. 2016 Aug;33(8):2064-87. doi: 10.1093/molbev/msw095. Epub 2016 May 11.
6
Molecular architecture of photoreceptor phosphodiesterase elucidated by chemical cross-linking and integrative modeling.
J Mol Biol. 2014 Nov 11;426(22):3713-3728. doi: 10.1016/j.jmb.2014.07.033. Epub 2014 Aug 19.
7
The GAFa domain of phosphodiesterase-6 contains a rod outer segment localization signal.
J Neurochem. 2014 Apr;129(2):256-63. doi: 10.1111/jnc.12501. Epub 2013 Nov 20.

本文引用的文献

2
Mechanism for the allosteric regulation of phosphodiesterase 2A deduced from the X-ray structure of a near full-length construct.
Proc Natl Acad Sci U S A. 2009 Oct 27;106(43):18225-30. doi: 10.1073/pnas.0907635106. Epub 2009 Oct 14.
3
Structural basis of phosphodiesterase 6 inhibition by the C-terminal region of the gamma-subunit.
EMBO J. 2009 Nov 18;28(22):3613-22. doi: 10.1038/emboj.2009.284. Epub 2009 Oct 1.
4
Cyclic GMP-hydrolyzing phosphodiesterases.
Handb Exp Pharmacol. 2009(191):367-408. doi: 10.1007/978-3-540-68964-5_16.
5
PDE6 in lamprey Petromyzon marinus: implications for the evolution of the visual effector in vertebrates.
Biochemistry. 2007 Sep 4;46(35):9992-10000. doi: 10.1021/bi700535s. Epub 2007 Aug 8.
6
Structural insight into substrate specificity of phosphodiesterase 10.
Proc Natl Acad Sci U S A. 2007 Apr 3;104(14):5782-7. doi: 10.1073/pnas.0700279104. Epub 2007 Mar 26.
7
Biochemistry and physiology of cyclic nucleotide phosphodiesterases: essential components in cyclic nucleotide signaling.
Annu Rev Biochem. 2007;76:481-511. doi: 10.1146/annurev.biochem.76.060305.150444.
8
Phototransduction in mouse rods and cones.
Pflugers Arch. 2007 Aug;454(5):805-19. doi: 10.1007/s00424-006-0194-y. Epub 2007 Jan 17.
9
Phototransduction, dark adaptation, and rhodopsin regeneration the proctor lecture.
Invest Ophthalmol Vis Sci. 2006 Dec;47(12):5137-52. doi: 10.1167/iovs.06-0849.
10
The inhibitory gamma subunit of the rod cGMP phosphodiesterase binds the catalytic subunits in an extended linear structure.
J Biol Chem. 2006 Jun 2;281(22):15412-22. doi: 10.1074/jbc.M600595200. Epub 2006 Apr 4.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验