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刚地弓形虫质体相关卟胆原合酶:动力学和结构特性验证了其治疗潜力。

Plastid-associated porphobilinogen synthase from Toxoplasma gondii: kinetic and structural properties validate therapeutic potential.

机构信息

Department of Biology, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.

出版信息

J Biol Chem. 2010 Jul 16;285(29):22122-31. doi: 10.1074/jbc.M110.107243. Epub 2010 May 4.

Abstract

Apicomplexan parasites (including Plasmodium spp. and Toxoplasma gondii) employ a four-carbon pathway for de novo heme biosynthesis, but this pathway is distinct from the animal/fungal C4 pathway in that it is distributed between three compartments: the mitochondrion, cytosol, and apicoplast, a plastid acquired by secondary endosymbiosis of an alga. Parasite porphobilinogen synthase (PBGS) resides within the apicoplast, and phylogenetic analysis indicates a plant origin. The PBGS family exhibits a complex use of metal ions (Zn(2+) and Mg(2+)) and oligomeric states (dimers, hexamers, and octamers). Recombinant T. gondii PBGS (TgPBGS) was purified as a stable approximately 320-kDa octamer, and low levels of dimers but no hexamers were also observed. The enzyme displays a broad activity peak (pH 7-8.5), with a K(m) for aminolevulinic acid of approximately 150 microM and specific activity of approximately 24 micromol of porphobilinogen/mg of protein/h. Like the plant enzyme, TgPBGS responds to Mg(2+) but not Zn(2+) and shows two Mg(2+) affinities, interpreted as tight binding at both the active and allosteric sites. Unlike other Mg(2+)-binding PBGS, however, metal ions are not required for TgPBGS octamer stability. A mutant enzyme lacking the C-terminal 13 amino acids distinguishing parasite PBGS from plant and animal enzymes purified as a dimer, suggesting that the C terminus is required for octamer stability. Parasite heme biosynthesis is inhibited (and parasites are killed) by succinylacetone, an active site-directed suicide substrate. The distinct phylogenetic, enzymatic, and structural features of apicomplexan PBGS offer scope for developing selective inhibitors of the parasite enzyme based on its quaternary structure characteristics.

摘要

疟原虫(包括疟原虫和刚地弓形虫)采用四碳途径从头合成血红素,但该途径与动物/真菌 C4 途径不同,因为它分布在三个隔室中:线粒体、细胞质和质体,质体是由藻类的二次内共生获得的。寄生虫原卟啉原合酶(PBGS)位于质体中,系统发育分析表明其起源于植物。PBGS 家族表现出对金属离子(Zn2+和 Mg2+)和寡聚状态(二聚体、六聚体和八聚体)的复杂利用。重组刚地弓形虫 PBGS(TgPBGS)被纯化为稳定的约 320kDa 八聚体,也观察到低水平的二聚体但没有六聚体。该酶显示出广泛的活性峰(pH7-8.5),对氨基酮戊酸的 K(m)约为 150µM,比活约为 24µmol 原卟啉原/mg 蛋白/h。与植物酶一样,TgPBGS 对 Mg2+有反应但对 Zn2+没有反应,并且表现出两种 Mg2+亲和力,解释为在活性和变构位点都有紧密结合。然而,与其他 Mg2+-结合的 PBGS 不同,金属离子不是 TgPBGS 八聚体稳定性所必需的。一种缺乏区分寄生虫 PBGS 与植物和动物酶的 C 末端 13 个氨基酸的突变酶被纯化为二聚体,表明 C 末端对于八聚体的稳定性是必需的。寄生虫血红素生物合成被琥珀酰丙酮抑制(寄生虫被杀死),琥珀酰丙酮是一种活性位点定向自杀底物。疟原虫 PBGS 的独特的系统发育、酶学和结构特征为基于其四级结构特征开发寄生虫酶的选择性抑制剂提供了机会。

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本文引用的文献

1
Structure of the heme biosynthetic Pseudomonas aeruginosa porphobilinogen synthase in complex with the antibiotic alaremycin.
Antimicrob Agents Chemother. 2010 Jan;54(1):267-72. doi: 10.1128/AAC.00553-09. Epub 2009 Oct 12.
2
Allosteric inhibition of human porphobilinogen synthase.
J Biol Chem. 2009 Dec 18;284(51):35807-17. doi: 10.1074/jbc.M109.026294.
3
Probing the oligomeric assemblies of pea porphobilinogen synthase by analytical ultracentrifugation.
Biochemistry. 2008 Oct 7;47(40):10649-56. doi: 10.1021/bi801128d. Epub 2008 Sep 17.
4
Shape shifting leads to small-molecule allosteric drug discovery.
Chem Biol. 2008 Jun;15(6):586-96. doi: 10.1016/j.chembiol.2008.04.012.
5
The biochemistry of heme biosynthesis.
Arch Biochem Biophys. 2008 Jun 15;474(2):238-51. doi: 10.1016/j.abb.2008.02.015. Epub 2008 Feb 21.
6
Kinetics and thermodynamics of the interchange of the morpheein forms of human porphobilinogen synthase.
Biochemistry. 2008 Mar 11;47(10):3245-57. doi: 10.1021/bi702113z. Epub 2008 Feb 14.
7
Inference of macromolecular assemblies from crystalline state.
J Mol Biol. 2007 Sep 21;372(3):774-97. doi: 10.1016/j.jmb.2007.05.022. Epub 2007 May 13.
8
Synthesis of bisubstrate inhibitors of porphobilinogen synthase from Pseudomonas aeruginosa.
Chem Biodivers. 2007 Feb;4(2):189-202. doi: 10.1002/cbdv.200790024.
9
ALAD porphyria is a conformational disease.
Am J Hum Genet. 2007 Feb;80(2):329-37. doi: 10.1086/511444. Epub 2006 Dec 21.
10
Morpheeins--a new structural paradigm for allosteric regulation.
Trends Biochem Sci. 2005 Sep;30(9):490-7. doi: 10.1016/j.tibs.2005.07.003.

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