Division of Structural Biology, Biozentrum, University of Basel, Klingelbergstr. 70, CH-4056 Basel, Switzerland.
J Mol Biol. 2010 Sep 3;401(5):843-53. doi: 10.1016/j.jmb.2010.06.011. Epub 2010 Jun 11.
Titin is a large intrasarcomeric protein that, among its many roles in muscle, is thought to modulate the in vivo assembly of the myosin motor filament. This is achieved through the molecular template properties of its A-band region, which is composed of fibronectin type III (FnIII) and immunoglobulin (Ig) domains organized into characteristic 7-domain (D-zone) and 11-domain (C-zone) superrepeats. Currently, there is little knowledge on the structural details of this region of titin. Here we report the conformational characterization of three FnIII tandems, A77-A78, A80-A82, and A84-A86, which are components of the representative fourth C-zone superrepeat. The structure of A77-A78 has been elucidated by X-ray crystallography to 1.65 A resolution, while low-resolution models of A80-A82 and A84-A86 have been calculated using small-angle X-ray scattering. A77-A78 adopts an extended "up-down" domain arrangement, where domains are connected by a hydrophilic three-residue linker sequence. The linker is embedded in a rich network of polar contacts at the domain interface that results in a stiff molecular conformation. The models of A80-A82 and A84-A86, which contain hydrophobic six-residue-long interdomain linkers, equally showed elongated molecular shapes, but with slightly coiled or zigzagged conformations. Small-angle X-ray scattering data further suggested that the long linkers do not result in a noticeable increase in molecular flexibility but lead to semibent domain arrangements. Our findings indicate that the structural characteristics of FnIII tandems from A-band titin contrast markedly with those of poly-Ig tandems from the elastic I-band, which exhibit domain interfaces depleted of interactions and compliant conformations. Furthermore, the analysis of sequence conservation in FnIII domains from A-band titin points to the existence of conformationally defined interfaces at specific superrepeat positions, possibly leading to a periodic and locally ordered architecture supporting the molecular scaffold properties of this region of titin.
肌联蛋白是一种大型肌节内蛋白,在其肌肉中的众多功能中,被认为可以调节肌球蛋白马达丝在体内的组装。这是通过其 A 带区域的分子模板特性实现的,该区域由纤维连接蛋白 III(FnIII)和免疫球蛋白(Ig)结构域组成,组织成特征性的 7 结构域(D 区)和 11 结构域(C 区)超重复。目前,关于肌联蛋白这一区域的结构细节知之甚少。在这里,我们报告了三个 FnIII 串联体 A77-A78、A80-A82 和 A84-A86 的构象特征,它们是代表性的第四 C 区超重复的组成部分。A77-A78 的结构已通过 X 射线晶体学解析至 1.65Å分辨率,而 A80-A82 和 A84-A86 的低分辨率模型则使用小角 X 射线散射计算得出。A77-A78 采用了扩展的“上下”结构域排列,其中结构域由亲水的三残基连接序列连接。连接序列嵌入在结构域界面处丰富的极性接触网络中,导致刚性分子构象。包含疏水性六残基长结构域间连接序列的 A80-A82 和 A84-A86 的模型同样显示出伸长的分子形状,但具有略微卷曲或锯齿状的构象。小角 X 射线散射数据进一步表明,长连接序列不会导致分子柔韧性的显著增加,而是导致半弯曲的结构域排列。我们的发现表明,来自 A 带肌联蛋白的 FnIII 串联体的结构特征与来自弹性 I 带的多 Ig 串联体明显不同,后者的结构域界面缺乏相互作用,具有柔顺的构象。此外,对 A 带肌联蛋白 FnIII 结构域序列保守性的分析表明,在特定超重复位置存在构象定义的界面,可能导致周期性和局部有序的结构,支持该区域肌联蛋白的分子支架特性。