Geological Survey of Denmark and Greenland (GEUS), DK-1350 Copenhagen, Denmark.
Appl Environ Microbiol. 2010 Aug;76(15):5025-31. doi: 10.1128/AEM.00628-10. Epub 2010 Jun 18.
The effects of three temperatures (5, 15, and 25 degrees C) on the survival of Salmonella enterica serovar Typhimurium in topsoil were investigated in small microcosms by three different techniques: plate counting, invA gene quantification, and invA mRNA quantification. Differences in survival were related to the effect of protozoan predation. Tetracycline-resistant Salmonella serovar Typhimurium was inoculated into soil and manure-amended soil at 1.5 x 10(8) cells g soil(-1). Population densities were determined by plate counting and by molecular methods and monitored for 42 days. Simultaneous extraction of RNA and DNA, followed by quantitative PCR, was used to investigate invA gene levels and expression. Analysis by these three techniques showed that Salmonella serovar Typhimurium survived better at 5 degrees C. Comparing DNA and CFU levels, significantly higher values were determined by DNA-based techniques. invA mRNA levels showed a fast decrease in activity, with no detectable mRNA after an incubation period of less than 4 days in any of the soil scenarios. A negative correlation was found between Salmonella serovar Typhimurium CFU levels and protozoan most probable numbers, and we propose the role of the predator-prey interaction as a factor to explain the die-off of the introduced strain by both culture- and DNA quantification-based methods. The results indicate that temperature, manure, and protozoan predation are important factors influencing the survival of Salmonella serovar Typhimurium in soil.
研究了三种温度(5、15 和 25°C)对表层土壤中鼠伤寒沙门氏菌生存的影响,使用三种不同技术在小微型生物群落中进行:平板计数、invA 基因定量和 invA mRNA 定量。存活差异与原生动物捕食的影响有关。四环素抗性鼠伤寒沙门氏菌以 1.5 x 10(8)细胞 g 土壤(-1)的浓度接种到土壤和粪肥改良的土壤中。通过平板计数和分子方法确定种群密度,并监测 42 天。同时提取 RNA 和 DNA,然后进行定量 PCR,以研究 invA 基因水平和表达。这三种技术的分析表明,鼠伤寒沙门氏菌在 5°C 下的存活率更高。比较 DNA 和 CFU 水平,DNA 技术确定的数值明显更高。invA mRNA 水平的活性迅速下降,在任何土壤情况下,孵育不到 4 天就无法检测到 mRNA。鼠伤寒沙门氏菌 CFU 水平与原生动物最可能数量呈负相关,我们提出捕食者-猎物相互作用的作用是解释基于培养和 DNA 定量的方法引入菌株死亡的一个因素。结果表明,温度、粪便和原生动物捕食是影响鼠伤寒沙门氏菌在土壤中生存的重要因素。