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水合苯酚蓝溶剂变色的从头算 Car-Parrinello 分子动力学混合量子力学-分子力学和 ZINDO 方法研究。

Solvatochromic shift of phenol blue in water from a combined Car-Parrinello molecular dynamics hybrid quantum mechanics-molecular mechanics and ZINDO approach.

机构信息

Department of Theoretical Chemistry, School of Biotechnology, Royal Institute of Technology, SE-10691 Stockholm, Sweden.

出版信息

J Chem Phys. 2010 Jun 21;132(23):234508. doi: 10.1063/1.3436516.

Abstract

The present work addresses the solvatochromic shift of phenol blue (PB) dye. For this purpose the results of Car-Parrinello molecular dynamics (CPMD) simulations for PB in gas phase are compared with results obtained for PB in water from CPMD hybrid quantum mechanics-molecular mechanics (CPMD-QM/MM) calculations. The absorption spectra were obtained using the intermediate neglect of differential overlap/spectroscopic-configuration interaction (INDO/CIS) method and were calculated for a multitude of configurations of the trajectory. The calculated lambda(max) for PB in gas phase was found to be about 535 nm, which is considerably lower than the lambda(max) reported for PB in nonpolar solvents. Different solvation shells for PB in water have been defined based on the solute-all-atoms and solvent center of mass radial distribution function (g(r(X-O))). The electronic excitation energies for PB computed in the presence of solvent molecules in an increasing number of solvation shells were calculated in a systematic way to evaluate their contributions to the solvatochrmic shift. The inclusion of solvent molecules in the hydration shell yields a lambda(max) of 640 nm, which contributes to almost 78% of the solvatochromic shift. The inclusion of solvent molecules up to 10 A in the g(r(X-O)) rdf yields a lambda(max) of 670 nm which is in good agreement with the experimentally reported value of 654-684 nm. Overall, the present study suggests that the combined CPMD-QM/MM and INDO-CIS approach can be used successfully to model solvatochromic shifts of organic dye molecules.

摘要

本工作研究了苯酚蓝(PB)染料的溶剂化变色。为此,将气相中 PB 的 Car-Parrinello 分子动力学(CPMD)模拟结果与 CPMD 杂化量子力学-分子力学(CPMD-QM/MM)计算得到的水中 PB 的结果进行了比较。使用中间忽略微分重叠/光谱-构型相互作用(INDO/CIS)方法获得了吸收光谱,并针对轨迹的多种构型进行了计算。计算得到的气相中 PB 的 lambda(max)约为 535nm,明显低于非极性溶剂中报道的 PB 的 lambda(max)。根据溶质所有原子和溶剂质心径向分布函数(g(r(X-O))),定义了水中 PB 的不同溶剂化壳。以系统的方式计算了在越来越多的溶剂化壳中存在溶剂分子时 PB 的电子激发能,以评估它们对溶剂化变色的贡献。将溶剂分子包含在水合壳中会导致 lambda(max)为 640nm,这对溶剂化变色的贡献约为 78%。在 g(r(X-O)) rdf 中包含溶剂分子至 10A 会导致 lambda(max)为 670nm,这与实验报道的 654-684nm 值非常吻合。总的来说,本研究表明,CPMD-QM/MM 和 INDO/CIS 方法的组合可成功用于模拟有机染料分子的溶剂化变色。

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