Department of Genetics, Washington University, Saint Louis, MO 63110, USA.
Genes Brain Behav. 2010 Oct;9(7):741-50. doi: 10.1111/j.1601-183X.2010.00608.x. Epub 2010 Jul 22.
Several independent studies show that the chromosome 15q25.1 region, which contains the CHRNA5-CHRNA3-CHRNB4 gene cluster, harbors variants strongly associated with nicotine dependence, other smoking behaviors, lung cancer and chronic obstructive pulmonary disease. We investigated whether variants in other cholinergic nicotinic receptor subunit (CHRN) genes affect the risk of nicotine dependence in a new sample of African Americans (AAs) (N = 710). We also analyzed this AA sample together with a European American (EA) sample (N = 2062, 1608 of which have been previously studied), allowing for differing effects in the two populations. Cases are current nicotine-dependent smokers and controls are non-dependent smokers. Variants in or near CHRND-CHRNG, CHRNA7 and CHRNA10 show modest association with nicotine dependence risk in the AA sample. In addition, CHRNA4, CHRNB3-CHRNA6 and CHRNB1 show association in at least one population. CHRNG and CHRNA4 harbor single nucleotide polymorphisms (SNPs) that have opposite directions of effect in the two populations. In each of the population samples, these loci substantially increase the trait variation explained, although no loci meet Bonferroni-corrected significance in the AA sample alone. The trait variation explained by three key associated SNPs in CHRNA5-CHRNA3-CHRNB4 is 1.9% in EAs and also 1.9% in AAs; this increases to 4.5% in EAs and 7.3% in AAs when we add six variants representing associations at other CHRN genes. Multiple nicotinic receptor subunit genes outside chromosome 15q25 are likely to be important in the biological processes and development of nicotine dependence, and some of these risks may be shared across diverse populations.
几项独立的研究表明,包含 CHRNA5-CHRNA3-CHRNB4 基因簇的 15q25.1 染色体区域,含有与尼古丁依赖、其他吸烟行为、肺癌和慢性阻塞性肺疾病强烈相关的变体。我们研究了其他胆碱能烟碱受体亚基(CHRN)基因中的变体是否会影响新的非裔美国人(AA)样本(N=710)中尼古丁依赖的风险。我们还分析了这个 AA 样本与欧洲裔美国人(EA)样本(N=2062,其中 1608 个已被先前研究过)一起,以允许在两个群体中产生不同的影响。病例是当前尼古丁依赖的吸烟者,对照组是非依赖的吸烟者。CHRND-CHRNG、CHRNA7 和 CHRNA10 中的变体或附近变体与 AA 样本中的尼古丁依赖风险有适度的关联。此外,CHRNA4、CHRNB3-CHRNA6 和 CHRNB1 在至少一个群体中存在关联。CHRNG 和 CHRNA4 含有单核苷酸多态性(SNP),在两个群体中的作用方向相反。在每个群体样本中,这些基因座大大增加了所解释的性状变异,尽管在单独的 AA 样本中没有基因座达到 Bonferroni 校正的显著性。CHRNA5-CHRNA3-CHRNB4 中三个关键关联 SNP 的性状变异在 EA 中为 1.9%,在 AA 中也为 1.9%;当我们添加代表其他 CHRN 基因关联的六个变体时,在 EA 中增加到 4.5%,在 AA 中增加到 7.3%。染色体 15q25 之外的多个烟碱受体亚基基因可能在尼古丁依赖的生物学过程和发展中很重要,其中一些风险可能在不同人群中共享。
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