ETH Zurich, Laboratory of Physical Chemistry, Wolfgang-Pauli-Str. 10. CH-8093 Zurich, Switzerland.
Mol Microbiol. 2010 Sep;77(6):1354-66. doi: 10.1111/j.1365-2958.2010.07319.x. Epub 2010 Aug 20.
The maltose/maltodextrin transport system of Escherichia coli/Salmonella, composed of periplasmic maltose-binding protein, MalE, the pore-forming subunits MalF and MalG, and a homodimer of the nucleotide-binding subunit, MalK, serves as a model for canonical ATP-binding cassette importers in general. The wealth of knowledge accumulated on the maltose transporter in more than three decades by genetic, molecular genetic and biochemical means was complemented more recently by crystal structures of the isolated MalK dimer and of two conformational states of the full transporter. Here, we summarize insights into the transport mechanism provided by these structures and draw the reader's attention to experimental tools by which the dynamics of the transporter can be studied during substrate translocation. A transport model is presented that integrates currently available biochemical, biophysical and structural data. We also present the state of knowledge on regulatory functions of the maltose transporter associated with the C-terminal domain of MalK. Finally, we will address the application of coarse-grained modelling to visualize the progression of the conformational changes of an ABC transporter with special emphasis on the maltose system, which can provide a model platform for testing and validating the bioinformatic tools.
大肠杆菌/沙门氏菌的麦芽糖/麦芽糊精转运系统由周质麦芽糖结合蛋白 MalE、形成孔道的亚基 MalF 和 MalG 以及核苷酸结合亚基 MalK 的同源二聚体组成,是一般典型的 ATP 结合盒转运蛋白的模型。通过遗传、分子遗传学和生物化学手段,在三十多年的时间里,人们积累了大量关于麦芽糖转运蛋白的知识,最近又通过分离的 MalK 二聚体和全转运蛋白的两种构象状态的晶体结构得到了补充。在这里,我们总结了这些结构提供的关于转运机制的见解,并提请读者注意研究转运过程中底物转运的动力学的实验工具。提出了一个将目前可用的生化、生物物理和结构数据整合在一起的运输模型。我们还介绍了与 MalK 的 C 末端结构域相关的麦芽糖转运蛋白的调节功能的知识现状。最后,我们将讨论粗粒度建模在可视化 ABC 转运蛋白构象变化方面的应用,特别强调麦芽糖系统,它可以为测试和验证生物信息学工具提供模型平台。