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利用遗传数据重建入侵途径:为什么、如何以及如此重要?

Reconstructing routes of invasion using genetic data: why, how and so what?

机构信息

INRA UMR Centre de Biologie et de Gestion des Populations (INRA/IRD/Cirad/Montpellier SupAgro), Campus international de Baillarguet, Montferrier-sur-Lez 34988, FranceEquipe 'Biologie des Populations en Interaction', UMR 1301 IBSV INRA-CNRS-Université de Nice-Sophia Antipolis 400 route des Chappes, 06903 Sophia-Antipolis Cedex, France.

出版信息

Mol Ecol. 2010 Oct;19(19):4113-30. doi: 10.1111/j.1365-294X.2010.04773.x. Epub 2010 Aug 13.

Abstract

Detailed knowledge about the geographical pathways followed by propagules from their source to the invading populations--referred to here as routes of invasion-provides information about the history of the invasion process and the origin and genetic composition of the invading populations. The reconstruction of invasion routes is required for defining and testing different hypotheses concerning the environmental and evolutionary factors responsible for biological invasions. In practical terms, it facilitates the design of strategies for controlling or preventing invasions. Most of our knowledge about the introduction routes of invasive species is derived from historical and observational data, which are often sparse, incomplete and, sometimes, misleading. In this context, population genetics has proved a useful approach for reconstructing routes of introduction, highlighting the complexity and the often counterintuitive nature of the true story. This approach has proved particularly useful since the recent development of new model-based methods, such as approximate Bayesian computation, making it possible to make quantitative inferences in the complex evolutionary scenarios typically encountered in invasive species. In this review, we summarize some of the fundamental aspects of routes of invasion, explain why the reconstruction of these routes is useful for addressing both practical and theoretical questions, and comment on the various reconstruction methods available. Finally, we consider the main insights obtained to date from studies of invasion routes.

摘要

关于繁殖体从其源到入侵种群所遵循的地理途径的详细知识——这里称为入侵途径——提供了有关入侵过程历史以及入侵种群的起源和遗传组成的信息。为了定义和测试与生物入侵有关的环境和进化因素的不同假设,需要重建入侵途径。在实践中,它有助于设计控制或预防入侵的策略。我们对入侵物种引入途径的大部分了解都来自历史和观测数据,这些数据往往稀疏、不完整,有时还具有误导性。在这种情况下,种群遗传学已被证明是重建引入途径的有用方法,突出了真实情况的复杂性和常常违反直觉的性质。自最近开发新的基于模型的方法(如近似贝叶斯计算)以来,这种方法特别有用,使得在入侵物种中通常遇到的复杂进化场景中进行定量推断成为可能。在这篇综述中,我们总结了入侵途径的一些基本方面,解释了为什么重建这些途径对于解决实际和理论问题都很有用,并评论了现有的各种重建方法。最后,我们考虑了迄今为止从入侵途径研究中获得的主要见解。

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