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[同基因品系中转座元件分布的变化——果蝇数量性状选择的原因还是结果?]

[Change in the distribution of transposable elements in isogenic strain--cause or consequence in Drosophila melanogaster selection for quantitative traits?].

作者信息

Zakharenko L P, Perepelkina M P, Vasil'eva L A

出版信息

Tsitologiia. 2010;52(6):487-92.

PMID:20737907
Abstract

The distribution patterns pf hobo transposon and Dm412 retrotransposon hybridization sites on the salivary gland polytene chromosomes from the larvae of Drosophila melanogaster isogenic strain 51, used for analyzing the effect of transposable element (TE) transposition on the selection for quantitative traits, were studied, It was demonstrated that at least half Dm412 hybridization sites were retained 15 years after isogenization; the frequency of Dm412 transposition varied from 2.0 x 10(-4) to 8.8 x 10(-5) depending on whether the appearance of the same hybridization sites in some individuals were regarded as independent events or as a manifestation of the sample heterogeneity. The distribution patterns of hobo hybridization sites in two isofemale strains derived from isogenic strain 51 differed more noticeably: the number of hobo sites in one of the derivative strains was threefold smaller than in another and only a fraction of the sites was common. Within each derivative strain, the TE distribution was uniform, suggesting that inbreeding had no effect on the Dm412 activity in this strain. The rates of change in the distribution patterns of various TEs in strain 51 corresponded to their spontaneous transposition rates. As isogenic strain accumulates the polymorphism in TE distribution without selection, the TEs are more likely to be the markers of selection events than their inducers. Thus, when studying the effects of various environmental factors on TE transposition even in isogenic strains, it is necessary to perform rounds of close inbreeding to reduce the potential polymorphism.

摘要

研究了黑腹果蝇同基因品系51幼虫唾液腺多线染色体上hobo转座子和Dm412反转录转座子杂交位点的分布模式,该品系用于分析转座元件(TE)转座对数量性状选择的影响。结果表明,同基因化15年后,至少一半的Dm412杂交位点得以保留;Dm412转座频率在2.0×10⁻⁴至8.8×10⁻⁵之间变化,这取决于某些个体中相同杂交位点的出现是被视为独立事件还是样本异质性的表现。源自同基因品系51的两个同雌系品系中hobo杂交位点的分布模式差异更为明显:其中一个衍生品系中的hobo位点数量比另一个少三倍,且只有一小部分位点是相同的。在每个衍生品系内,TE分布是均匀的,这表明近亲繁殖对该品系中的Dm412活性没有影响。品系51中各种TE分布模式的变化速率与其自发转座速率相对应。由于同基因品系在没有选择的情况下积累了TE分布的多态性,TE更有可能是选择事件的标记而非其诱导因素。因此,即使在同基因品系中研究各种环境因素对TE转座的影响时,也有必要进行多轮近亲繁殖以减少潜在的多态性。

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