Department of Biochemistry and Molecular Biophysics, Washington University School of Medicine, Saint Louis, Missouri 63110, USA.
Biochemistry. 2010 Oct 5;49(39):8445-54. doi: 10.1021/bi100984j. Epub 2010 Sep 10.
In Saccharomyces cerevisiae, Pif1 is involved in a wide range of DNA transactions. It operates both in mitochondria and in the nucleus, where it has telomeric and non-telomeric functions. All of the activities of Pif1 rely on its ability to bind to DNA. We have determined the mode of Pif1 binding to different DNA substrates. While Pif1 is a monomer in solution, we show that binding of ssDNA to Pif1 induces protein dimerization. DNA-induced dimerization of Pif1 is also observed on tailed- and forked-dsDNA substrates, suggesting that on the latter formation of a Pif1 dimer prevents binding of additional Pif1 molecules. A dimer of Pif1 also forms on ssDNA of random composition and in the presence of saturating concentrations of nonhydrolyzable ATP analogues. The observation that a Pif1 dimer is formed on unwinding substrates in the presence of ATP analogues suggests that a dimeric form of the enzyme might constitute the pre-initiation complex leading to its unwinding activity.
在酿酒酵母中,Pif1 参与了广泛的 DNA 代谢过程。它在线粒体和细胞核中均有功能,具有端粒和非端粒功能。Pif1 的所有活性都依赖于其与 DNA 结合的能力。我们已经确定了 Pif1 与不同 DNA 底物结合的模式。虽然 Pif1 在溶液中是单体,但我们发现 Pif1 与单链 DNA 的结合会诱导蛋白质二聚化。在带尾和分叉双链 DNA 底物上也观察到 Pif1 的 DNA 诱导二聚化,这表明在后一种情况下,Pif1 二聚体的形成会阻止其他 Pif1 分子的结合。Pif1 二聚体也会在随机组成的 ssDNA 上形成,并且在饱和浓度的非水解型 ATP 类似物存在的情况下。在 ATP 类似物存在的情况下,在解链底物上形成 Pif1 二聚体的观察结果表明,酶的二聚体形式可能构成导致其解链活性的起始前复合物。