Edward A. Doisy Department of Biochemistry and Molecular Biology, Saint Louis University School of Medicine, St. Louis, Missouri 63104, USA.
J Phys Chem B. 2010 Dec 16;114(49):16156-65. doi: 10.1021/jp106041v. Epub 2010 Sep 3.
Adenosine deaminase (ADA) is a key enzyme in purine metabolism and crucial for normal immune competence. It is a 40 kDa monomeric TIM-barrel protein containing a tightly bound Zn(2+), which is required for activity. In this study, we have investigated the role of Zn(2+) with respect to ADA structure and stability. After removing Zn(2+), the crystallographic structure of the protein remains highly ordered and similar to that of the holo protein with structural changes limited to regions capping the active site pocket. The stability of the protein, however, is decreased significantly in the absence of Zn(2+). Denaturation with urea shows the midpoint to be about 3.5 M for the apo enzyme, compared with 6.4 M for the holo enzyme. ADA contains four tryptophan residues distant from the Zn(2+) site. (19)F NMR studies in the presence and absence of Zn(2+) were carried out after incorporation of 6-(19)F-tryptophan. Chemical shift differences were observed for three of the four tryptophan residues, suggesting that, in contrast to the X-ray data, Zn(2+)-induced structural changes are propagated throughout the protein. Changes throughout the structure as suggested by the NMR data may explain the lower stability of the Zn(2+)-free protein. Real-time (19)F NMR spectroscopy measuring the loss of Zn(2+) showed that structural changes correlated with the loss of enzymatic activity.
腺苷脱氨酶(ADA)是嘌呤代谢中的关键酶,对正常的免疫功能至关重要。它是一种 40 kDa 的单体 TIM 桶蛋白,含有紧密结合的 Zn(2+),这对于其活性是必需的。在本研究中,我们研究了 Zn(2+)对 ADA 结构和稳定性的作用。除去 Zn(2+)后,蛋白质的晶体结构仍然高度有序,与全酶结构相似,结构变化仅限于覆盖活性位点口袋的区域。然而,在没有 Zn(2+)的情况下,蛋白质的稳定性显著降低。脲变性表明apo 酶的中点约为 3.5 M,而 holo 酶的中点为 6.4 M。ADA 含有四个远离 Zn(2+)位点的色氨酸残基。在加入 6-(19)F-色氨酸后,进行了存在和不存在 Zn(2+)的(19)F NMR 研究。观察到四个色氨酸残基中的三个的化学位移差异,表明与 X 射线数据相反,Zn(2+)诱导的结构变化在整个蛋白质中传播。NMR 数据表明的整个结构的变化可能解释了无 Zn(2+)蛋白的较低稳定性。实时(19)F NMR 光谱测量 Zn(2+)的损失表明结构变化与酶活性的丧失相关。