Suppr超能文献

探索最小的 p53 二组分模型。

Exploring a minimal two-component p53 model.

机构信息

State Key Laboratory of Pharmaceutical Biotechnology, School of Life Sciences, Nanjing University, Nanjing, 210093, People's Republic of China.

出版信息

Phys Biol. 2010 Sep 10;7(3):036008. doi: 10.1088/1478-3975/7/3/036008.

Abstract

The tumor suppressor p53 coordinates many attributes of cellular processes via interlocked feedback loops. To understand the biological implications of feedback loops in a p53 system, a two-component model which encompasses essential feedback loops was constructed and further explored. Diverse bifurcation properties, such as bistability and oscillation, emerge by manipulating the feedback strength. The p53-mediated MDM2 induction dictates the bifurcation patterns. We first identified irradiation dichotomy in p53 models and further proposed that bistability and oscillation can behave in a coordinated manner. Further sensitivity analysis revealed that p53 basal production and MDM2-mediated p53 degradation, which are central to cellular control, are most sensitive processes. Also, we identified that the much more significant variations in amplitude of p53 pulses observed in experiments can be derived from overall amplitude parameter sensitivity. The combined approach with bifurcation analysis, stochastic simulation and sampling-based sensitivity analysis not only gives crucial insights into the dynamics of the p53 system, but also creates a fertile ground for understanding the regulatory patterns of other biological networks.

摘要

肿瘤抑制因子 p53 通过互锁的反馈环协调细胞过程的许多属性。为了理解反馈环在 p53 系统中的生物学意义,构建并进一步探索了一个包含基本反馈环的两组件模型。通过操纵反馈强度,出现了多种分岔特性,如双稳和振荡。p53 介导的 MDM2 诱导决定了分岔模式。我们首先在 p53 模型中确定了辐照二分法,进一步提出双稳和振荡可以协调作用。进一步的敏感性分析表明,p53 基础产生和 MDM2 介导的 p53 降解是细胞控制的核心,是最敏感的过程。此外,我们还发现实验中观察到的 p53 脉冲幅度的显著变化可以从整体幅度参数敏感性中推导出来。分岔分析、随机模拟和基于抽样的敏感性分析的组合方法不仅为 p53 系统的动力学提供了关键的见解,也为理解其他生物网络的调控模式提供了肥沃的土壤。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验