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培养和直接 PCR 表明热带森林草本植物中不同真菌内生菌存在普遍的宿主泛化现象。

Culturing and direct PCR suggest prevalent host generalism among diverse fungal endophytes of tropical forest grasses.

机构信息

Department of Biology, University of Utah, Salt Lake City, Utah 84112, USA.

出版信息

Mycologia. 2011 Mar-Apr;103(2):247-60. doi: 10.3852/09-158. Epub 2010 Oct 1.

Abstract

Most studies examining endophytic fungi associated with grasses (Poaceae) have focused on agronomically important species in managed ecosystems or on wild grasses in subtropical, temperate and boreal grasslands. However grasses first arose in tropical forests, where they remain a significant and diverse component of understory and forest-edge communities. To provide a broader context for understanding grass-endophyte associations we characterized fungal endophyte communities inhabiting foliage of 11 species of phylogenetically diverse C(3) grasses in the understory of a lowland tropical forest at Barro Colorado Island, Panama. Our sample included members of early-arising subfamilies of Poaceae that are endemic to forests, as well as more recently arising subfamilies that transitioned to open environments. Isolation on culture media and direct PCR and cloning revealed that these grasses harbor species-rich and phylogenetically diverse communities that lack the endophytic Clavicipitaceae known from diverse woodland and pasture grasses in the temperate zone. Both the incidence and diversity of endophytes was consistent among grass species regardless of subfamily, clade affiliation or ancestral habitat use. Genotype and phylogenetic analyses suggest that these endophytic fungi are predominantly host generalists, shared not only among distinctive lineages of Poaceae but also with non-grass plants at the same site.

摘要

大多数研究草类(禾本科)内生真菌的文章主要集中在管理生态系统中具有农业重要性的物种或亚热带、温带和北方草原的野生草类上。然而,草类最初出现在热带森林中,在那里它们仍然是林下和林缘群落的重要和多样的组成部分。为了更广泛地了解草类-内生菌的关系,我们对巴拿马巴罗科罗拉多岛低地热带森林林下 11 种系统发育多样的 C(3)草类叶片中的内生真菌群落进行了特征描述。我们的样本包括起源于森林的禾本科早期亚科的成员,以及最近向开阔环境过渡的亚科。在培养介质上进行分离,直接进行 PCR 和克隆,结果表明,这些草类含有丰富的、具有系统发育多样性的内生真菌群落,缺乏温带不同林地和牧场草类中已知的内生拟枝孢属真菌。无论亚科、分支隶属关系或祖先栖息地利用如何,内生菌的发病率和多样性在草类物种中都是一致的。基因型和系统发育分析表明,这些内生真菌主要是宿主广适应种,不仅存在于禾本科的不同谱系中,而且也存在于同一地点的非禾本科植物中。

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