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细胞质 5'-核苷酸酶的活性和调节部位。

Active and regulatory sites of cytosolic 5'-nucleotidase.

机构信息

Dipartimento di Biologia, Unità di Biochimica, Università di Pisa, Pisa, Italy.

出版信息

FEBS J. 2010 Dec;277(23):4863-72. doi: 10.1111/j.1742-4658.2010.07891.x. Epub 2010 Oct 12.

DOI:10.1111/j.1742-4658.2010.07891.x
PMID:21029378
Abstract

Cytosolic 5'-nucleotidase (cN-II), which acts preferentially on 6-hydroxypurine nucleotides, is essential for the survival of several cell types. cN-II catalyses both the hydrolysis of nucleotides and transfer of their phosphate moiety to a nucleoside acceptor through formation of a covalent phospho-intermediate. Both activities are regulated by a number of phosphorylated compounds, such as diadenosine tetraphosphate (Ap₄A), ADP, ATP, 2,3-bisphosphoglycerate (BPG) and phosphate. On the basis of a partial crystal structure of cN-II, we mutated two residues located in the active site, Y55 and T56. We ascertained that the ability to catalyse the transfer of phosphate depends on the presence of a bulky residue in the active site very close to the aspartate residue that forms the covalent phospho-intermediate. The molecular model indicates two possible sites at which adenylic compounds may interact. We mutated three residues that mediate interaction in the first activation site (R144, N154, I152) and three in the second (F127, M436 and H428), and found that Ap₄A and ADP interact with the same site, but the sites for ATP and BPG remain uncertain. The structural model indicates that cN-II is a homotetrameric protein that results from interaction through a specific interface B of two identical dimers that have arisen from interaction of two identical subunits through interface A. Point mutations in the two interfaces and gel-filtration experiments indicated that the dimer is the smallest active oligomerization state. Finally, gel-filtration and light-scattering experiments demonstrated that the native enzyme exists as a tetramer, and no further oligomerization is required for enzyme activation.

摘要

细胞质 5'-核苷酸酶 (cN-II) 优先作用于 6-羟基嘌呤核苷酸,对几种细胞类型的存活至关重要。cN-II 通过形成共价磷酸中间物,同时催化核苷酸的水解和磷酸部分向核苷受体的转移。这两种活性都受到许多磷酸化化合物的调节,如二腺苷四磷酸 (Ap₄A)、ADP、ATP、2,3-二磷酸甘油酸 (BPG) 和磷酸盐。基于 cN-II 的部分晶体结构,我们突变了两个位于活性位点的残基,Y55 和 T56。我们确定,催化磷酸转移的能力取决于活性位点中非常接近形成共价磷酸中间物的天冬氨酸残基的大体积残基的存在。分子模型表明腺嘌呤化合物可能在两个可能的位点相互作用。我们突变了三个在第一个激活位点(R144、N154、I152)和三个在第二个激活位点(F127、M436 和 H428)中介导相互作用的残基,发现 Ap₄A 和 ADP 与相同的位点相互作用,但 ATP 和 BPG 的位点仍不确定。结构模型表明,cN-II 是一种同源四聚体蛋白,通过两个相同二聚体之间的特定界面 B 相互作用而形成,这两个相同二聚体是通过界面 A 两个相同亚基相互作用而产生的。两个界面的点突变和凝胶过滤实验表明,二聚体是最小的活性寡聚化状态。最后,凝胶过滤和光散射实验表明,天然酶以四聚体形式存在,并且不需要进一步的寡聚化即可激活酶。

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