Suppr超能文献

UMI,一种新型的 RNF168 泛素结合结构域,参与 DNA 损伤信号通路。

UMI, a novel RNF168 ubiquitin binding domain involved in the DNA damage signaling pathway.

机构信息

Department of DISCAFF and DFB Center, University of Piemonte Orientale A. Avogadro, 28100 Novara, Italy.

出版信息

Mol Cell Biol. 2011 Jan;31(1):118-26. doi: 10.1128/MCB.00818-10. Epub 2010 Nov 1.

Abstract

Ubiquitination regulates important cellular processes, including the DNA damage response (DDR) and DNA repair. The complexity of the ubiquitin-mediated signals is decoded by ubiquitin receptors, which contain protein modules named ubiquitin binding domains (UBDs). We previously identified a new ubiquitin ligase, RNF168, involved in DDR and endowed with two UBDs named MIU (motif interacting with ubiquitin). Here we have provided the identification of a novel UBD, the UMI (UIM- and MIU-related UBD), present in RNF168, and characterized the interaction surface with ubiquitin, centered on two Leu residues. We have demonstrated that integrity of the UMI, in addition to the MIUs, is necessary for the proper localization of RNF168 and for ubiquitination of nuclear proteins, including histone H2A. Finally, we have shown that simultaneous inactivation of UMI and MIUs prevents the recruitment to DDR foci of the crucial downstream mediator 53BP1.

摘要

泛素化调节重要的细胞过程,包括 DNA 损伤反应(DDR)和 DNA 修复。泛素介导的信号的复杂性由泛素受体解码,泛素受体包含命名为泛素结合域(UBD)的蛋白模块。我们之前鉴定了一种新的参与 DDR 的泛素连接酶 RNF168,它具有两个命名为 MIU(与泛素相互作用的基序)的 UBD。在这里,我们发现了 RNF168 中存在的一个新的 UBD,即 UMI(UIM 和 MIU 相关的 UBD),并确定了与泛素相互作用的表面,该表面以两个亮氨酸残基为中心。我们已经证明,UMI 的完整性(除了 MIUs 之外)对于 RNF168 的正确定位和核蛋白(包括组蛋白 H2A)的泛素化是必要的。最后,我们表明,同时失活 UMI 和 MIUs 会阻止关键下游介质 53BP1 募集到 DDR 焦点。

相似文献

1
UMI, a novel RNF168 ubiquitin binding domain involved in the DNA damage signaling pathway.
Mol Cell Biol. 2011 Jan;31(1):118-26. doi: 10.1128/MCB.00818-10. Epub 2010 Nov 1.
2
RNF168 promotes noncanonical K27 ubiquitination to signal DNA damage.
Cell Rep. 2015 Jan 13;10(2):226-38. doi: 10.1016/j.celrep.2014.12.021. Epub 2015 Jan 8.
3
53BP1 is a reader of the DNA-damage-induced H2A Lys 15 ubiquitin mark.
Nature. 2013 Jul 4;499(7456):50-4. doi: 10.1038/nature12318. Epub 2013 Jun 12.
4
A small ubiquitin binding domain inhibits ubiquitin-dependent protein recruitment to DNA repair foci.
Cell Cycle. 2013 Dec 15;12(24):3749-58. doi: 10.4161/cc.26640. Epub 2013 Oct 3.
5
Histone H2A variants alpha1-extension helix directs RNF168-mediated ubiquitination.
Nat Commun. 2020 May 18;11(1):2462. doi: 10.1038/s41467-020-16307-4.
6
USP7 deubiquitinase promotes ubiquitin-dependent DNA damage signaling by stabilizing RNF168.
Cell Cycle. 2015;14(9):1413-25. doi: 10.1080/15384101.2015.1007785.
7
USP14 regulates DNA damage repair by targeting RNF168-dependent ubiquitination.
Autophagy. 2018;14(11):1976-1990. doi: 10.1080/15548627.2018.1496877. Epub 2018 Aug 10.
8
Ubiquitin Phosphorylation at Thr12 Modulates the DNA Damage Response.
Mol Cell. 2020 Nov 5;80(3):423-436.e9. doi: 10.1016/j.molcel.2020.09.017. Epub 2020 Oct 5.
9
Ubiquitin-H2AX fusions render 53BP1 recruitment to DNA damage sites independent of RNF8 or RNF168.
Cell Cycle. 2015;14(11):1748-58. doi: 10.1080/15384101.2015.1010918.

引用本文的文献

1
PCNA-binding activity separates RNF168 functions in DNA replication and DNA double-stranded break signaling.
Nucleic Acids Res. 2024 Nov 27;52(21):13019-13035. doi: 10.1093/nar/gkae918.
2
A Site-Specific Click Chemistry Approach to Di-Ubiquitylate H1 Variants Reveals Position-Dependent Stimulation of the DNA Repair Protein RNF168.
Angew Chem Int Ed Engl. 2024 Dec 20;63(52):e202408435. doi: 10.1002/anie.202408435. Epub 2024 Nov 14.
3
A review: targeting UBR5 domains to mediate emerging roles and mechanisms - chance or necessity?
Int J Surg. 2024 Aug 1;110(8):4947-4964. doi: 10.1097/JS9.0000000000001541.
4
Preserving genome integrity: The vital role of SUMO-targeted ubiquitin ligases.
Cell Insight. 2023 Oct 23;2(6):100128. doi: 10.1016/j.cellin.2023.100128. eCollection 2023 Dec.
5
Chromatin Ubiquitination Guides DNA Double Strand Break Signaling and Repair.
Front Cell Dev Biol. 2022 Jul 5;10:928113. doi: 10.3389/fcell.2022.928113. eCollection 2022.
6
New answers to the old RIDDLE: RNF168 and the DNA damage response pathway.
FEBS J. 2022 May;289(9):2467-2480. doi: 10.1111/febs.15857. Epub 2021 Apr 16.
7
Histone H2A variants alpha1-extension helix directs RNF168-mediated ubiquitination.
Nat Commun. 2020 May 18;11(1):2462. doi: 10.1038/s41467-020-16307-4.
8
Crosstalk between Lys63- and Lys11-polyubiquitin signaling at DNA damage sites is driven by Cezanne.
Genes Dev. 2019 Dec 1;33(23-24):1702-1717. doi: 10.1101/gad.332395.119. Epub 2019 Nov 7.
9
Structural basis of ubiquitin recognition by the winged-helix domain of Cockayne syndrome group B protein.
Nucleic Acids Res. 2019 Apr 23;47(7):3784-3794. doi: 10.1093/nar/gkz081.
10

本文引用的文献

1
The diversity of ubiquitin recognition: hot spots and varied specificity.
Mol Cell. 2010 Jun 11;38(5):627-35. doi: 10.1016/j.molcel.2010.05.003.
2
The ubiquitin landscape at DNA double-strand breaks.
J Cell Biol. 2009 Nov 2;187(3):319-26. doi: 10.1083/jcb.200908074.
3
Ubiquitin-binding domains - from structures to functions.
Nat Rev Mol Cell Biol. 2009 Oct;10(10):659-71. doi: 10.1038/nrm2767.
4
The emerging complexity of protein ubiquitination.
Biochem Soc Trans. 2009 Oct;37(Pt 5):937-53. doi: 10.1042/BST0370937.
6
Principles of ubiquitin and SUMO modifications in DNA repair.
Nature. 2009 Mar 26;458(7237):461-7. doi: 10.1038/nature07963.
7
Ubiquitylation in innate and adaptive immunity.
Nature. 2009 Mar 26;458(7237):430-7. doi: 10.1038/nature07959.
8
Regulatory ubiquitylation in response to DNA double-strand breaks.
DNA Repair (Amst). 2009 Apr 5;8(4):436-43. doi: 10.1016/j.dnarep.2009.01.013. Epub 2009 Feb 18.
9
Nonproteolytic functions of ubiquitin in cell signaling.
Mol Cell. 2009 Feb 13;33(3):275-86. doi: 10.1016/j.molcel.2009.01.014.
10
Ubiquitin-binding domains and their role in the DNA damage response.
DNA Repair (Amst). 2009 Apr 5;8(4):544-56. doi: 10.1016/j.dnarep.2009.01.003. Epub 2009 Feb 12.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验