Chen Julian C H, Mustyakimov Marat, Schoenborn Benno P, Langan Paul, Blum Marc Michael
Institute of Biophysical Chemistry, Goethe University Frankfurt, Max-von-Laue-Strasse 9, 60438 Frankfurt, Germany.
Acta Crystallogr D Biol Crystallogr. 2010 Nov;66(Pt 11):1131-8. doi: 10.1107/S0907444910034013. Epub 2010 Oct 20.
Diisopropyl fluorophosphatase (DFPase) is a calcium-dependent phosphotriesterase that acts on a variety of highly toxic organophosphorus compounds that act as inhibitors of acetylcholinesterase. The mechanism of DFPase has been probed using a variety of methods, including isotopic labelling, which demonstrated the presence of a phosphoenzyme intermediate in the reaction mechanism. In order to further elucidate the mechanism of DFPase and to ascertain the protonation states of the residues and solvent molecules in the active site, the neutron structure of DFPase was solved at 2.2 Å resolution. The proposed nucleophile Asp229 is deprotonated, while the active-site solvent molecule W33 was identified as water and not hydroxide. These data support a mechanism involving direct nucleophilic attack by Asp229 on the substrate and rule out a mechanism involving metal-assisted water activation. These data also allowed for the re-engineering of DFPase through rational design to bind and productively orient the more toxic S(P) stereoisomers of the nerve agents sarin and cyclosarin, creating a modified enzyme with enhanced overall activity and significantly increased detoxification properties.
二异丙基氟磷酸酶(DFPase)是一种钙依赖性磷酸三酯酶,作用于多种作为乙酰胆碱酯酶抑制剂的剧毒有机磷化合物。已使用多种方法探究了DFPase的作用机制,包括同位素标记,该方法证明了反应机制中存在磷酰酶中间体。为了进一步阐明DFPase的作用机制并确定活性位点中残基和溶剂分子的质子化状态,以2.2 Å的分辨率解析了DFPase的中子结构。所提出的亲核试剂天冬氨酸229去质子化,而活性位点溶剂分子W33被鉴定为水而非氢氧根。这些数据支持了一种机制,即天冬氨酸229对底物进行直接亲核攻击,排除了涉及金属辅助水活化的机制。这些数据还允许通过合理设计对DFPase进行重新改造,以结合并有效定向神经毒剂沙林和环沙林毒性更强的S(P)立体异构体,从而创建一种具有增强的整体活性和显著提高解毒特性的改良酶。