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西班牙人群年龄相关性黄斑变性的遗传相关性研究。

Genetic association study of age-related macular degeneration in the Spanish population.

机构信息

Hospital-University Complex of Santiago, Santiago de Compostela, Spain.

出版信息

Acta Ophthalmol. 2011 Feb;89(1):e12-22. doi: 10.1111/j.1755-3768.2010.02040.x. Epub 2010 Nov 25.

Abstract

PURPOSE

To investigate new genetic risk factors and replicate reported associations with advanced age-related macular degeneration (AMD) in a prospective case-control study developed with a Spanish cohort.

METHODS

Three hundred and fifty-three unrelated patients with advanced AMD (225 with atrophic AMD, 57 with neovascular AMD, and 71 with mixed AMD) and 282 age-matched controls were included. Functional and tagging SNPs in 55 candidate genes were genotyped using the SNPlex™ genotyping system. Single SNP and haplotype association analysis were performed to determine possible genetic associations; interaction effects between SNPs were also investigated.

RESULTS

In agreement with previous reports, ARMS2 and CFH genes were strongly associated with AMD in the studied Spanish population. Moreover, both loci influenced risk independently giving support to different pathways implicated in AMD pathogenesis. No evidence for association of advanced AMD with other previous reported susceptibility genes, such as CST3, CX3CR1, FBLN5, HMCN1, PON1, SOD2, TLR4, VEGF and VLDLR, was detected. However, two additional genes appear to be candidate markers for the development of advanced AMD. A variant located at the 3' UTR of the FGF2 gene (rs6820411) was highly associated with atrophic AMD, and the functional SNP rs3112831 at ABCA4 showed a marginal association with the disease.

CONCLUSION

We performed a large gene association study in advanced AMD in a Spanish population. Our findings show that CFH and ARMS2 genes seem to be the principal risk loci contributing independently to AMD in our cohort. We report new significant associations that could also influence the development of advanced AMD. These findings should be confirmed in further studies with larger cohorts.

摘要

目的

在一项前瞻性病例对照研究中,我们通过西班牙队列来研究新的遗传风险因素,并复制与晚期年龄相关性黄斑变性(AMD)相关的报道。

方法

共纳入 353 例晚期 AMD 患者(225 例萎缩性 AMD,57 例新生血管性 AMD,71 例混合性 AMD)和 282 例年龄匹配的对照者。使用 SNPlex™基因分型系统对 55 个候选基因的功能和标签 SNP 进行基因分型。通过单 SNP 和单倍型关联分析来确定可能的遗传关联;同时还研究了 SNP 之间的相互作用效应。

结果

与先前的报道一致,ARMS2 和 CFH 基因在西班牙人群中与 AMD 有很强的关联。此外,这两个位点独立地影响风险,为 AMD 发病机制中涉及的不同途径提供了支持。未发现晚期 AMD 与其他先前报道的易感性基因(如 CST3、CX3CR1、FBLN5、HMCN1、PON1、SOD2、TLR4、VEGF 和 VLDLR)相关的证据。然而,有两个额外的基因似乎是晚期 AMD 发生的候选标志物。位于 FGF2 基因 3'UTR 的变异 rs6820411 与萎缩性 AMD 高度相关,而 ABCA4 上的功能 SNP rs3112831 与疾病呈边缘相关。

结论

我们在西班牙人群中进行了一项关于晚期 AMD 的大型基因关联研究。我们的研究结果表明,CFH 和 ARMS2 基因似乎是我们队列中独立导致 AMD 的主要风险基因座。我们报告了新的显著关联,也可能影响晚期 AMD 的发生。这些发现应在具有更大队列的进一步研究中得到证实。

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本文引用的文献

3
Age-related macular degeneration.
N Engl J Med. 2008 Jun 12;358(24):2606-17. doi: 10.1056/NEJMra0801537.
4
SNP analysis to results (SNPator): a web-based environment oriented to statistical genomics analyses upon SNP data.
Bioinformatics. 2008 Jul 15;24(14):1643-4. doi: 10.1093/bioinformatics/btn241. Epub 2008 May 30.
5
Age-related macular degeneration is associated with an unstable ARMS2 (LOC387715) mRNA.
Nat Genet. 2008 Jul;40(7):892-6. doi: 10.1038/ng.170. Epub 2008 May 30.
6
Apolipoprotein E genotype and risk for development of cataract and age-related macular degeneration.
Acta Ophthalmol. 2008 Jun;86(4):401-3. doi: 10.1111/j.1600-0420.2007.01070.x.
7
Age-related macular degeneration genetics.
Ophthalmology. 2008 May;115(5):916-916.e1. doi: 10.1016/j.ophtha.2007.12.012.
8
Toll-like receptor polymorphisms and age-related macular degeneration.
Invest Ophthalmol Vis Sci. 2008 Apr;49(4):1652-9. doi: 10.1167/iovs.07-1378.
9
Functional and structural implications of the complement factor H Y402H polymorphism associated with age-related macular degeneration.
Invest Ophthalmol Vis Sci. 2008 May;49(5):1763-70. doi: 10.1167/iovs.07-1297. Epub 2008 Feb 8.
10
Comprehensive analysis of the candidate genes CCL2, CCR2, and TLR4 in age-related macular degeneration.
Invest Ophthalmol Vis Sci. 2008 Jan;49(1):364-71. doi: 10.1167/iovs.07-0656.

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