Kumar G Senthil, Upadhyay Sanjeev, Mathew M K, Sarma Siddhartha P
Molecular Biophysics Unit, Indian Institute of Science, Bangalore 560012, India.
Biochim Biophys Acta. 2011 Apr;1814(4):459-69. doi: 10.1016/j.bbapap.2011.01.006. Epub 2011 Jan 21.
The three dimensional structure of a 32 residue three disulfide scorpion toxin, BTK-2, from the Indian red scorpion Mesobuthus tamulus has been determined using isotope edited solution NMR methods. Samples for structural and electrophysiological studies were prepared using recombinant DNA methods. Electrophysiological studies show that the peptide is active against hK(v)1.1 channels. The structure of BTK-2 was determined using 373 distance restraints from NOE data, 66 dihedral angle restraints from NOE, chemical shift and scalar coupling data, 6 constraints based on disulfide linkages and 8 constraints based on hydrogen bonds. The root mean square deviation (r.m.s.d) about the averaged co-ordinates of the backbone (N, C(α), C') and all heavy atoms are 0.81 ± 0.23Å and 1.51 ± 0.29Å respectively. The backbone dihedral angles (ϕ and ψ) for all residues occupy the favorable and allowed regions of the Ramachandran map. The three dimensional structure of BTK-2 is composed of three well defined secondary structural regions that constitute the α-β-β structural motif. Comparisons between the structure of BTK-2 and other closely related scorpion toxins pointed towards distinct differences in surface properties that provide insights into the structure-function relationships among this important class of voltage-gated potassium channel inhibiting peptides.
利用同位素编辑溶液核磁共振方法,确定了来自印度红蝎(Mesobuthus tamulus)的32个残基、含有三个二硫键的蝎毒素BTK - 2的三维结构。使用重组DNA方法制备了用于结构和电生理研究的样品。电生理研究表明,该肽对hK(v)1.1通道具有活性。BTK - 2的结构是利用来自NOE数据的373个距离约束、来自NOE、化学位移和标量耦合数据的66个二面角约束、基于二硫键的6个约束以及基于氢键的8个约束确定的。相对于主链(N、C(α)、C')和所有重原子的平均坐标,均方根偏差(r.m.s.d)分别为0.81±0.23Å和1.51±0.29Å。所有残基的主链二面角(ϕ和ψ)占据了拉氏图的有利和允许区域。BTK - 2的三维结构由三个明确的二级结构区域组成,构成了α-β-β结构基序。BTK - 2与其他密切相关的蝎毒素结构之间的比较表明,表面性质存在明显差异,这为深入了解这类重要的电压门控钾通道抑制肽的结构-功能关系提供了线索。