Department of Chemistry and Biochemistry, University of California, Santa Barbara, California 93106, USA.
J Phys Chem A. 2011 Jun 16;115(23):6077-87. doi: 10.1021/jp110601w. Epub 2011 Mar 17.
We investigated the variation in conformation for the amino acid tyrosine (Y), alone and in the small peptides tyrosine-glycine (YG) and tyrosine-glycine-glycine (YGG), in the gas phase by using UV-UV and IR-UV double resonance spectroscopy and density functional theory calculations. For tyrosine we found seven different conformations, for YG we found four different conformations, and for YGG we found three different conformations. As the peptides get larger, we observe fewer stable conformers, despite the increasing complexity and number of degrees of freedom. We find structural trends similar to those in phenylalanine-glycine-glycine (FGG) and tryptophan-glycine-glycine (WGG); however, the effect of dispersive forces in FGG for stabilizing a folded structure is replaced by that of hydrogen bonding in YGG.
我们通过紫外-紫外和红外-紫外双共振光谱和密度泛函理论计算研究了氨基酸酪氨酸 (Y)、小肽酪氨酸-甘氨酸 (YG) 和酪氨酸-甘氨酸-甘氨酸 (YGG) 在气相中的构象变化。对于酪氨酸,我们发现了七种不同的构象,对于 YG,我们发现了四种不同的构象,对于 YGG,我们发现了三种不同的构象。随着肽的增大,尽管自由度的复杂性和数量增加,但我们观察到的稳定构象却较少。我们发现与苯丙氨酸-甘氨酸-甘氨酸 (FGG) 和色氨酸-甘氨酸-甘氨酸 (WGG) 相似的结构趋势;然而,在 FGG 中分散力稳定折叠结构的作用被 YGG 中氢键所取代。