Rodionov A V, Nosov N N, Kim E S, Machs E M, Punina E O, Probatova N S
Genetika. 2010 Dec;46(12):1598-608.
The involvement of present-day diploid bluegrass species in the formation of polyploid genomes was investigated using comparison of sequences of internal transcribed spacers ITS1 and ITS2, and the 5.8S rDNA sequence. It was demonstrated that highly polyploid New Zealand bluegrasses, P. cita (2n = 84; ca. 96 to 100), P. chathamica (2n = 112), and P. litorosa (2n = 263 to 266) formed separate highly supported clade together with tetraploids (2n = 28) P. intrusa, P. anceps, and P. trioides (Austrofestuca littoralis). Among the diploid species (2n = 14), the closest relatives of these species, as well as of the polyploid species of section Poa, are the genomes of Eurasian species P. remota, P. chaixcii (sect. Homalopoa), P densa (Bolbophorum), and P. sibirica (sect. Macropoa). Nuclear genomes of polyploid Stenopoa, Tichopoa, Oreinos, and Secundae are definitely related to the genome of Arctic species P. pseudabbreviata (sect. Abbreviatae). On the contrary, judging by the genes for nuclear 45S rRNA, genomes of diploid P. trivialis (sect. Pandemos), P. annua, and P. supina (sect. Ochlopoa both) are only remotely related to the genomes of highly polyploid species (distances p between them and other bluegrass species from different sections of subgenus Poa constitute 6-10% and 11-15%, respectively). The conclusion on the relationships between highly polyploid and diploid bluegrass species was tested using analysis of synapomorphic mutations in the 5.8S rRNA gene. It was demonstrated that genomes of Poa eminens (2n = 42) and P. schischkinii (2n = 70) (sect. Arctopoa both) were noticeably different in ITS regions from the genomes of the members of the type subgenus Poa. A comparison of the Arctopoa ITS regions showed that the differences between them constituted only 0.2%. At the same time, p distances between the Arctopoa ITS and those from the species belonging to other sections of the genus Poa varied from 5 to 14%. South American species P chonotica (sect. Andinae) (=Ncoraepoa chonotica) (2n = 42) was found to be related to Arctagrostis, Festucella, and Hookerochloa, being at the same time quite distant from the other species of the genus Poa. Polymorphic in chromosome number highly polyploid species of Northern Hemisphere, P. arctica (2n = 42 to 106), P. turneri (2n = 42, 63 to 64), and P. smirnovii (2n = 42, 70) (sect. Malacanthae) are relative to a large group of tetraploid (2n = 28) endemic bluegrass species from New Zealand and sub-Antarctic islands (P. novae-zelandiae and allied species).
利用内部转录间隔区ITS1和ITS2以及5.8S rDNA序列进行比较,研究了当今二倍体早熟禾物种在多倍体基因组形成中的作用。结果表明,高度多倍体的新西兰早熟禾物种,如P. cita(2n = 84;约96至100)、P. chathamica(2n = 112)和P. litorosa(2n = 263至266)与四倍体(2n = 28)的P. intrusa、P. anceps和P. trioides(滨海澳羊茅)一起形成了单独的、得到高度支持的分支。在二倍体物种(2n = 14)中,这些物种以及早熟禾组多倍体物种的最亲近亲属是欧亚物种P. remota、P. chaixcii(Homalopoa组)、P densa(Bolbophorum)和P. sibirica(Macropoa组)的基因组。多倍体窄颖早熟禾属、毛颖早熟禾属、山地早熟禾属和第二早熟禾属的核基因组肯定与北极物种P. pseudabbreviata(Abbreviatae组)的基因组有关。相反,从核45S rRNA基因来看,二倍体的普通早熟禾(Pandemos组)、一年生早熟禾和仰卧早熟禾(均为Ochlopoa组)的基因组与高度多倍体物种的基因组关系甚远(它们与早熟禾亚属不同组的其他早熟禾物种之间的距离p分别为6 - 10%和11 - 15%)。利用对5.8S rRNA基因中的同形共源突变分析,验证了高度多倍体和二倍体早熟禾物种之间关系的结论。结果表明,eminens早熟禾(2n = 42)和schischkinii早熟禾(2n = 70)(均为Arctopoa组)的基因组在ITS区域与模式亚属早熟禾成员的基因组明显不同。对Arctopoa组ITS区域进行比较表明,它们之间的差异仅为0.2%。与此同时,Arctopoa组ITS与早熟禾属其他组物种的ITS之间的距离p在5%至14%之间。发现南美物种P chonotica(Andinae组)(=Ncoraepoa chonotica)(2n = 42)与北极虎尾草属、小羊茅属和胡克羊茅属有关,同时与早熟禾属的其他物种相距甚远。北半球染色体数多态的高度多倍体物种,如北极早熟禾(2n = 42至106)、特纳早熟禾(2n = 42、63至64)和斯米尔诺夫早熟禾(2n = 42、70)(Malacanthae组)与来自新西兰和亚南极岛屿的一大群四倍体(2n = 28)特有早熟禾物种(新西兰早熟禾及近缘物种)相关。