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从学术 RNAi 筛选机构中听到的故事;常见问题解答。

Tales from an academic RNAi screening facility; FAQs.

机构信息

High-Throughput Screening facility, Cancer Research UK, London Research Institute.

出版信息

Brief Funct Genomics. 2011 Jul;10(4):227-37. doi: 10.1093/bfgp/elr016. Epub 2011 Apr 28.

Abstract

RNAi technology is now a well-established and widely employed research technique that has been adopted by many researchers for use in large-scale screening campaigns. Here, we offer our experience of genome-wide siRNA screening from the perspective of a facility providing screening as a service to a wide range of researchers with diverse interests and approaches. We have experienced the emotional rollercoaster of screening from the exuberant early promise of a screen, the messy reality of the data through to the recognition of screen data as a potential information goldmine. Here, we use some of the questions we most frequently encounter to highlight the initial concerns of many researchers embarking on a siRNA screen and conclude that an informed view of what can be reasonably expected from a screen is essential to the most effective implementation of the technology. Along the way, we suggest that for this area of research at least, either centralization of the resources or close and open collaboration between interested parties offers distinct advantages.

摘要

RNAi 技术现已成为一种成熟且广泛应用的研究技术,许多研究人员都采用该技术进行大规模筛选实验。在此,我们将从提供筛选服务的机构的角度,分享我们在全基因组 siRNA 筛选方面的经验,该机构的服务对象是具有不同兴趣和方法的广泛研究人员。我们在筛选过程中经历了从充满希望到面对混乱数据的过山车式体验,最终认识到筛选数据具有成为潜在信息金矿的潜力。在这里,我们使用一些我们最常遇到的问题来突出许多刚开始 siRNA 筛选的研究人员最初关注的问题,并得出结论:对筛选可以合理预期的结果有一个明智的看法,对于最有效地实施该技术至关重要。在此过程中,我们认为,至少对于这一研究领域,集中资源或利益相关方之间的密切和开放合作具有明显优势。

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