• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

抗肿瘤靶点的反向虚拟筛选:天然生物活性化合物小数据库的初步研究。

Inverse virtual screening of antitumor targets: pilot study on a small database of natural bioactive compounds.

机构信息

Dipartimento di Scienze Farmaceutiche e Biomediche, Università di Salerno, Via Ponte Don Melillo, 84084 Fisciano (SA), Italy.

出版信息

J Nat Prod. 2011 Jun 24;74(6):1401-7. doi: 10.1021/np100935s. Epub 2011 May 4.

DOI:10.1021/np100935s
PMID:21542600
Abstract

An inverse virtual screening in silico approach has been applied to natural bioactive molecules to screen their efficacy against proteins involved in cancer processes, with the aim of directing future experimental assays. Docking studies were performed on a panel of 126 protein targets extracted from the Protein Data Bank, to analyze their possible interactions with a small library of 43 bioactive compounds. Analysis of the molecular docking results was performed through the use of tables containing energy data organized in a matrix. The application of this approach may facilitate the prediction of the activity of unknown ligands for known targets involved in the development of cancer and could be applied to other models based on different libraries of ligands and different panels of targets.

摘要

已经应用了一种反向虚拟筛选的计算方法来筛选天然生物活性分子对涉及癌症过程的蛋白质的疗效,旨在指导未来的实验检测。对从蛋白质数据库中提取的 126 个蛋白质靶标进行了对接研究,以分析它们与一小部分 43 种生物活性化合物的可能相互作用。通过使用包含按矩阵组织的能量数据的表格来分析分子对接结果。该方法的应用可以促进对已知靶标中未知配体活性的预测,这些靶标涉及癌症的发展,并且可以应用于其他基于不同配体库和不同靶标组的模型。

相似文献

1
Inverse virtual screening of antitumor targets: pilot study on a small database of natural bioactive compounds.抗肿瘤靶点的反向虚拟筛选:天然生物活性化合物小数据库的初步研究。
J Nat Prod. 2011 Jun 24;74(6):1401-7. doi: 10.1021/np100935s. Epub 2011 May 4.
2
Importance of molecular computer modeling in anticancer drug development.分子计算机建模在抗癌药物研发中的重要性。
J BUON. 2007 Sep;12 Suppl 1:S101-18.
3
Evaluation of library ranking efficacy in virtual screening.虚拟筛选中库排名效能的评估。
J Comput Chem. 2005 Jan 15;26(1):11-22. doi: 10.1002/jcc.20141.
4
Ranking targets in structure-based virtual screening of three-dimensional protein libraries: methods and problems.基于结构的三维蛋白质文库虚拟筛选中的靶点排序:方法与问题
J Chem Inf Model. 2008 May;48(5):1014-25. doi: 10.1021/ci800023x. Epub 2008 Apr 16.
5
A web-based platform for virtual screening.一个基于网络的虚拟筛选平台。
J Mol Graph Model. 2003 Sep;22(1):71-82. doi: 10.1016/S1093-3263(03)00137-2.
6
HierVLS hierarchical docking protocol for virtual ligand screening of large-molecule databases.用于大分子数据库虚拟配体筛选的HierVLS分层对接协议。
J Med Chem. 2004 Jan 1;47(1):56-71. doi: 10.1021/jm030271v.
7
Pharmacophore identification, in silico screening, and virtual library design for inhibitors of the human factor Xa.人凝血因子Xa抑制剂的药效团识别、计算机筛选及虚拟文库设计
J Chem Inf Model. 2005 Jan-Feb;45(1):146-59. doi: 10.1021/ci049778k.
8
A comprehensive docking study on the selectivity of binding of aromatic compounds to proteins.关于芳香族化合物与蛋白质结合选择性的全面对接研究。
J Chem Inf Comput Sci. 2003 Sep-Oct;43(5):1576-83. doi: 10.1021/ci034052u.
9
Automatic and efficient decomposition of two-dimensional structures of small molecules for fragment-based high-throughput docking.用于基于片段的高通量对接的小分子二维结构的自动高效分解
J Med Chem. 2006 Dec 14;49(25):7384-92. doi: 10.1021/jm060838i.
10
LigandScout: 3-D pharmacophores derived from protein-bound ligands and their use as virtual screening filters.LigandScout:源自与蛋白质结合的配体的三维药效团及其作为虚拟筛选过滤器的用途。
J Chem Inf Model. 2005 Jan-Feb;45(1):160-9. doi: 10.1021/ci049885e.

引用本文的文献

1
Untargeted Diversity-Oriented Synthesis for the Discovery of New Antitumor Agents: An Integrated Approach of Inverse Virtual Screening, Bioinformatics, and Omics for Target Deconvolution.用于发现新型抗肿瘤药物的非靶向多样性导向合成:一种用于靶点反卷积的逆虚拟筛选、生物信息学和组学的综合方法。
J Med Chem. 2025 Aug 14;68(15):16483-16517. doi: 10.1021/acs.jmedchem.5c01344. Epub 2025 Jul 24.
2
Exploring the Potential of Phytocannabinoids Against Multidrug-Resistant Bacteria.探索植物大麻素对抗多重耐药细菌的潜力。
Plants (Basel). 2025 Jun 20;14(13):1901. doi: 10.3390/plants14131901.
3
In Vitro and In Silico Evaluation of Red Algae Anticancer Activity.
体外和计算机模拟评估红藻的抗癌活性。
Mar Drugs. 2023 May 24;21(6):318. doi: 10.3390/md21060318.
4
Design and Identification of Inhibitors for the Spike-ACE2 Target of SARS-CoV-2.设计和鉴定针对 SARS-CoV-2 的刺突-ACE2 靶点的抑制剂。
Int J Mol Sci. 2023 May 16;24(10):8814. doi: 10.3390/ijms24108814.
5
Complementary Dual Approach for In Silico Target Identification of Potential Pharmaceutical Compounds in Cystic Fibrosis.互补双途径法在囊性纤维化潜在药物化合物的计算机目标识别中的应用
Int J Mol Sci. 2022 Oct 15;23(20):12351. doi: 10.3390/ijms232012351.
6
Polypharmacology-based approach for screening TCM against coinfection of and .基于多靶点药物疗法的中药抗[具体两种感染名称缺失]合并感染筛选方法
Front Vet Sci. 2022 Sep 26;9:972245. doi: 10.3389/fvets.2022.972245. eCollection 2022.
7
Phytochemical Analysis of the Methanolic Extract and Essential Oil from Leaves of Industrial Hemp Cultivar: Isolation of a New Cannabinoid Derivative and Biological Profile Using Computational Approaches.工业大麻品种叶片甲醇提取物和精油的植物化学分析:一种新型大麻素衍生物的分离及基于计算方法的生物学特征研究
Plants (Basel). 2022 Jun 24;11(13):1671. doi: 10.3390/plants11131671.
8
Accelerating the repurposing of FDA-approved drugs against coronavirus disease-19 (COVID-19).加速重新利用美国食品药品监督管理局(FDA)批准的药物来对抗冠状病毒病(COVID-19)。
RSC Adv. 2020 Nov 10;10(67):40867-40875. doi: 10.1039/d0ra09010g. eCollection 2020 Nov 9.
9
Drug Discovery of Plausible Lead Natural Compounds That Target the Insulin Signaling Pathway: Bioinformatics Approaches.靶向胰岛素信号通路的潜在先导天然化合物的药物发现:生物信息学方法
Evid Based Complement Alternat Med. 2022 Mar 20;2022:2832889. doi: 10.1155/2022/2832889. eCollection 2022.
10
Biological Profile of Two L. Metabolites Using Computational Approaches and In Vitro Tests.采用计算方法和体外试验研究两种 L. 代谢产物的生物学特性。
Biomolecules. 2021 Oct 9;11(10):1490. doi: 10.3390/biom11101490.