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乳酸乳球菌ABC多药转运蛋白LmrA核苷酸结合结构域处于ADP结合状态时的主链核磁共振共振归属

Backbone NMR resonance assignments of the nucleotide binding domain of the ABC multidrug transporter LmrA from Lactococcus lactis in its ADP-bound state.

作者信息

Hellmich Ute A, Duchardt-Ferner Elke, Glaubitz Clemens, Wöhnert Jens

机构信息

Institut für Molekulare Biowissenschaften, Johann-Wolfgang-Goethe-Universität Frankfurt/M., Max-von-Laue-Str. 9, 60438 Frankfurt, Germany.

出版信息

Biomol NMR Assign. 2012 Apr;6(1):69-73. doi: 10.1007/s12104-011-9327-0. Epub 2011 Jul 23.

Abstract

LmrA from Lactococcus lactis is a multidrug transporter and a member of the ATP binding cassette (ABC) transporter family. ABC transporters consist of a transmembrane domain (TMD) and a nucleotide binding domain (NBD). The NBD contains the highly conserved signature motifs of this transporter superfamily. In the case of LmrA, the TMD and the NBD are expressed as a single polypeptide. LmrA catalyzes the extrusion of hydrophobic compounds including antibiotics from the cell membrane at the expense of ATP hydrolysis. ATP binds to the NBD, where binding and hydrolysis induce conformational changes that lead to the extrusion of the substrate via the TMD. Here, we report the (1)H, (13)C and (15)N backbone chemical shift assignments of the isolated 263 amino acid containing NBD of LmrA in its ADP bound state.

摘要

来自乳酸乳球菌的LmrA是一种多药转运蛋白,属于ATP结合盒(ABC)转运蛋白家族。ABC转运蛋白由一个跨膜结构域(TMD)和一个核苷酸结合结构域(NBD)组成。NBD包含该转运蛋白超家族高度保守的特征基序。就LmrA而言,TMD和NBD作为单一多肽表达。LmrA催化包括抗生素在内的疏水性化合物从细胞膜排出,这一过程以ATP水解为代价。ATP与NBD结合,结合和水解在NBD处诱导构象变化,进而导致底物通过TMD排出。在此,我们报告了处于ADP结合状态的、分离出的含263个氨基酸的LmrA的NBD的(1)H、(13)C和(15)N主链化学位移归属。

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