Suppr超能文献

遗传结构与北美的北美的后冰河时代藤壶的扩张,半蹼滨螺。

Genetic structure and the North American postglacial expansion of the barnacle, Semibalanus balanoides.

机构信息

Department of Ecology and Evolutionary Biology, Brown University, Providence, RI, USA.

出版信息

J Hered. 2012 Mar-Apr;103(2):153-65. doi: 10.1093/jhered/esr083. Epub 2011 Sep 1.

Abstract

Population genetic characteristics are shaped by the life-history traits of organisms and the geologic history of their habitat. This study provides a neutral framework for understanding the population dynamics and opportunities for selection in Semibalanus balanoides, a species that figures prominently in ecological and evolutionary studies in the Atlantic intertidal. We used mitochondrial DNA (mtDNA) control region (N = 131) and microsatellite markers (∼40 individuals/site/locus) to survey populations of the broadly dispersing acorn barnacle from 8 sites spanning 800 km of North American coast and 1 site in Europe. Patterns of mtDNA sequence evolution were consistent with larger population sizes in Europe and population expansion at the conclusion of the last ice age, approximately 20 000 years ago, in North America. A significant portion of mitochondrial diversity was partitioned between the continents (ϕ(ST) = 0.281), but there was only weak structure observed from mtDNA within North America. Microsatellites showed significant structuring between the continents (F(ST) = 0.021) as well as within North America (F(ST) = 0.013). Isolation by distance in North America was largely driven by a split between populations south of Cape Cod and all others (P < 10(-4)). The glacial events responsible for generating allelic diversity at mtDNA and microsatellites may also be responsible for generating selectable variation at metabolic enzymes in S. balanoides.

摘要

人口遗传特征是由生物体的生活史特征和其栖息地的地质历史所塑造的。本研究为了解 Semibalanus balanoides 的种群动态和选择机会提供了一个中立的框架,该物种在大西洋潮间带的生态和进化研究中占据重要地位。我们使用线粒体 DNA(mtDNA)控制区(N = 131)和微卫星标记(每个位点/基因座约 40 个个体)对广泛分布的橡果藤壶进行了种群调查,这些种群来自北美海岸 800 公里范围内的 8 个地点和欧洲的 1 个地点。mtDNA 序列进化模式与欧洲较大的种群规模以及约 2 万年前末次冰期结束时北美的种群扩张一致。大量的线粒体多样性在各大洲之间存在差异(ϕ(ST) = 0.281),但在北美的 mtDNA 内仅观察到微弱的结构。微卫星显示各大洲之间存在显著的结构(F(ST) = 0.021)以及北美的结构(F(ST) = 0.013)。北美的隔离距离主要由科德角以南的种群与其他所有种群之间的分裂驱动(P < 10(-4))。导致 mtDNA 和微卫星等位基因多样性产生的冰川事件,也可能导致 S. balanoides 代谢酶的可选择变异产生。

相似文献

1
Genetic structure and the North American postglacial expansion of the barnacle, Semibalanus balanoides.
J Hered. 2012 Mar-Apr;103(2):153-65. doi: 10.1093/jhered/esr083. Epub 2011 Sep 1.
2
Genetic variation in the acorn barnacle from allozymes to population genomics.
Integr Comp Biol. 2012 Sep;52(3):418-29. doi: 10.1093/icb/ics099. Epub 2012 Jul 4.
6
Phylogeography of a habitat specialist with high dispersal capability: the Savi's Warbler Locustella luscinioides.
PLoS One. 2012;7(6):e38497. doi: 10.1371/journal.pone.0038497. Epub 2012 Jun 11.
7
Phylogeography of ninespine sticklebacks (Pungitius pungitius) in North America: glacial refugia and the origins of adaptive traits.
Mol Ecol. 2010 Sep;19(18):4061-76. doi: 10.1111/j.1365-294X.2010.04801.x. Epub 2010 Aug 31.
8
Ecological Load and Balancing Selection in Circumboreal Barnacles.
Mol Biol Evol. 2021 Jan 23;38(2):676-685. doi: 10.1093/molbev/msaa227.

引用本文的文献

1
From tides to nucleotides: Genomic signatures of adaptation to environmental heterogeneity in barnacles.
Mol Ecol. 2021 Dec;30(23):6417-6433. doi: 10.1111/mec.15949. Epub 2021 May 24.
2
Ecological Load and Balancing Selection in Circumboreal Barnacles.
Mol Biol Evol. 2021 Jan 23;38(2):676-685. doi: 10.1093/molbev/msaa227.
3
Footprints of natural selection at the mannose-6-phosphate isomerase locus in barnacles.
Proc Natl Acad Sci U S A. 2020 Mar 10;117(10):5376-5385. doi: 10.1073/pnas.1918232117. Epub 2020 Feb 25.
4
The Story of a Hitchhiker: Population Genetic Patterns in the Invasive Barnacle Balanus(Amphibalanus) improvisus Darwin 1854.
PLoS One. 2016 Jan 28;11(1):e0147082. doi: 10.1371/journal.pone.0147082. eCollection 2016.
5
Phylogeography of a Marine Insular Endemic in the Atlantic Macaronesia: The Azorean Barnacle, Megabalanus azoricus (Pilsbry, 1916).
PLoS One. 2015 Apr 28;10(4):e0124707. doi: 10.1371/journal.pone.0124707. eCollection 2015.
8
Genetic variation in the acorn barnacle from allozymes to population genomics.
Integr Comp Biol. 2012 Sep;52(3):418-29. doi: 10.1093/icb/ics099. Epub 2012 Jul 4.

本文引用的文献

1
GENETIC EVIDENCE FOR LONG TERM PERSISTENCE OF MARINE INVERTEBRATE POPULATIONS IN AN EPHEMERAL ENVIRONMENT.
Evolution. 1997 Jun;51(3):993-998. doi: 10.1111/j.1558-5646.1997.tb03681.x.
2
LARVAL DISPERSAL AND LOCAL ADAPTATION IN ACORN BARNACLES.
Evolution. 1993 Feb;47(1):316-320. doi: 10.1111/j.1558-5646.1993.tb01221.x.
3
PERSPECTIVE: HIGHLY VARIABLE LOCI AND THEIR INTERPRETATION IN EVOLUTION AND CONSERVATION.
Evolution. 1999 Apr;53(2):313-318. doi: 10.1111/j.1558-5646.1999.tb03767.x.
4
DEPENDENCE OF GENE FLOW ON GEOGRAPHIC DISTANCE IN TWO SOLITARY CORALS WITH DIFFERENT LARVAL DISPERSAL CAPABILITIES.
Evolution. 1996 Jun;50(3):1167-1175. doi: 10.1111/j.1558-5646.1996.tb02357.x.
6
THE PHYSIOLOGICAL BASIS OF NATURAL SELECTION AT THE LAP LOCUS.
Evolution. 1985 Nov;39(6):1302-1317. doi: 10.1111/j.1558-5646.1985.tb05696.x.
8
Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows.
Mol Ecol Resour. 2010 May;10(3):564-7. doi: 10.1111/j.1755-0998.2010.02847.x. Epub 2010 Mar 1.
9
smogd: software for the measurement of genetic diversity.
Mol Ecol Resour. 2010 May;10(3):556-7. doi: 10.1111/j.1755-0998.2009.02801.x. Epub 2009 Dec 8.
10
Effects of selection and mutation on mitochondrial variation and inferences of historical population expansion in a Caribbean reef fish.
Mol Phylogenet Evol. 2010 Nov;57(2):821-8. doi: 10.1016/j.ympev.2010.07.014. Epub 2010 Aug 3.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验