Iwasaki Kenji
Research Center for Structural and Functional Proteomics, Institute for Protein Research, Osaka University, Suita, Osaka, Japan.
Methods Mol Biol. 2012;757:111-28. doi: 10.1007/978-1-61779-166-6_9.
Rotary-shadowed samples often used for electron microscopy do not preserve native integrin conformations. Negatively stained integrins - or, more desirably, unstained integrins in a cryo-condition - are now being used with sophisticated imaging techniques. Additionally, a single-particle analysis (SPA) of integrins is advanced by the recent determination of several crystal structures of integrins. Nevertheless the conformational flexibility of integrins limits the ability of SPA to image physiologic conformations. To solve this problem, we apply electron tomography to purified integrin, thereby obtaining high-quality three-dimensional (3-D) images that fit well to the atomic structures. We have also taken typical SPA approaches to obtain a 3-D reconstruction of integrin, using conditions that favor the bent conformation.
常用于电子显微镜的旋转阴影样本无法保留整合素的天然构象。现在,负染色的整合素——或者更理想的是,处于冷冻条件下未染色的整合素——正与先进的成像技术一起使用。此外,整合素的单颗粒分析(SPA)因最近测定的几种整合素晶体结构而取得进展。然而,整合素的构象灵活性限制了SPA对生理构象成像的能力。为了解决这个问题,我们将电子断层扫描应用于纯化的整合素,从而获得与原子结构非常匹配的高质量三维(3-D)图像。我们还采用了典型的SPA方法,在有利于弯曲构象的条件下获得整合素的三维重建。