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一个 C 型环样结构域参与蛋白自组装和矿物成核。

A C-RING-like domain participates in protein self-assembly and mineral nucleation.

机构信息

Laboratory for Chemical Physics, New York University, 345 East 24th Street, New York, New York 10010, USA.

出版信息

Biochemistry. 2011 Oct 18;50(41):8880-7. doi: 10.1021/bi201346d. Epub 2011 Sep 26.

Abstract

AP7 is a nacre-associated protein of the mollusk shell that forms supramolecular assemblies that nucleate single-crystal aragonite in vitro. AP7 possesses two major sequence regions: a random coil 30-amino acid N-terminal domain (AP7N) and a partially disordered 36-amino acid C-terminal domain (AP7C) that exhibits imperfect sequence homology to the C subclass of the intracellular RING domain family. We report here new findings that implicate the C-RING domain in AP7-mediated supramolecular assembly and single-crystal mineral formation. AP7 protein spontaneously self-assembles over a pH range of 4-9 and is monomeric at pH >9.5. AP7N and AP7C both oligomerize over the pH range of 4-9, with the AP7C sequence closely resembling AP7 in terms of particle morphology and size. In vitro mineralization experiments demonstrate that both AP7N and AP7C form supramolecular assemblies that nucleate single-crystal calcium carbonates. Comparison of previously published nuclear magnetic resonance-based structures of AP7C and AP7N reveals the significant presence of complementary anionic-cationic electrostatic molecular surfaces on AP7C that are not found on AP7N, and this may explain the noted discrepancies between the two domains in terms of self-assembly and single-crystal nucleation. We conclude that the C-RING-like sequence is an important site for AP7 self-association and mineral nucleation, and this represents the first known instance of a RING-like sequence performing these functions within an extracellular protein.

摘要

AP7 是一种来自软体动物贝壳的珍珠层相关蛋白,能够形成超分子组装体,从而在体外诱导单晶文石的形成。AP7 具有两个主要的序列区域:一个 30 个氨基酸的无规卷曲 N 端结构域(AP7N)和一个部分无序的 36 个氨基酸的 C 端结构域(AP7C),该结构域与细胞内 RING 结构域家族的 C 亚类表现出不完全的序列同源性。我们在此报告新的发现,表明 C-RING 结构域参与了 AP7 介导的超分子组装和单晶矿物形成。AP7 蛋白在 pH 值为 4-9 的范围内自发地进行自我组装,在 pH 值大于 9.5 时呈单体状态。AP7N 和 AP7C 在 pH 值为 4-9 的范围内都能发生寡聚化,AP7C 序列在颗粒形态和大小方面与 AP7 非常相似。体外矿化实验表明,AP7N 和 AP7C 都能形成超分子组装体,从而诱导单晶碳酸钙的形成。比较先前发表的基于核磁共振的 AP7C 和 AP7N 结构揭示了 AP7C 上存在显著的互补阴离子-阳离子静电分子表面,而在 AP7N 上则不存在,这可能解释了这两个结构域在自我组装和单晶成核方面的显著差异。我们得出结论,C-RING 样序列是 AP7 自我组装和矿物成核的重要位点,这代表了 RING 样序列在细胞外蛋白中发挥这些功能的首例已知实例。

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