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D-氨基酸氧化酶的测定

Assays of D-amino acid oxidases.

作者信息

Tedeschi Gabriella, Pollegioni Loredano, Negri Armando

机构信息

Dipartimento di Patologia Animale, Igiene e Sanità Pubblica Veterinaria - sez. Biochimica, Università degli Studi di Milano, Milano, Italy.

出版信息

Methods Mol Biol. 2012;794:381-95. doi: 10.1007/978-1-61779-331-8_26.

DOI:10.1007/978-1-61779-331-8_26
PMID:21956578
Abstract

D-Amino acid oxidase and D-aspartate oxidase are two well-known FAD-containing flavooxidases that catalyze the same reaction (the oxidative deamination) on different D-amino acids. D-aspartate oxidase is specific for acidic D-amino acids (i.e., D-aspartate and D-glutamate) and D-amino acid oxidase is active on neutral and polar D-amino acids (a low activity is also detected on basic D-amino acids). The assay of these flavoenzymes is of utmost importance in different fields because D-amino acids are common constituents of bacterial cell walls, are present in foods and because free D-serine and D-aspartic acid were identified in brain and peripheral tissues of mammals. In this chapter, we report on the most used methods employed to assay the activity of D-amino acid oxidase and D-aspartate oxidase. Interestingly, their activity can be followed using different assays, namely D-amino acid or oxygen consumption, α-keto acid or ammonia production, or using artificial dyes as final indicator of the flavin redox reaction.

摘要

D-氨基酸氧化酶和D-天冬氨酸氧化酶是两种著名的含黄素腺嘌呤二核苷酸(FAD)的黄素氧化酶,它们对不同的D-氨基酸催化相同的反应(氧化脱氨反应)。D-天冬氨酸氧化酶对酸性D-氨基酸(即D-天冬氨酸和D-谷氨酸)具有特异性,而D-氨基酸氧化酶对中性和极性D-氨基酸具有活性(在碱性D-氨基酸上也检测到低活性)。这些黄素酶的测定在不同领域至关重要,因为D-氨基酸是细菌细胞壁的常见成分,存在于食物中,还因为在哺乳动物的脑和外周组织中发现了游离的D-丝氨酸和D-天冬氨酸。在本章中,我们报告了用于测定D-氨基酸氧化酶和D-天冬氨酸氧化酶活性的最常用方法。有趣的是,可以使用不同的测定方法来跟踪它们的活性,即D-氨基酸或氧气消耗、α-酮酸或氨的产生,或者使用人工染料作为黄素氧化还原反应的最终指示剂。

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1
Assays of D-amino acid oxidases.D-氨基酸氧化酶的测定
Methods Mol Biol. 2012;794:381-95. doi: 10.1007/978-1-61779-331-8_26.
2
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Active site plasticity in D-amino acid oxidase: a crystallographic analysis.D-氨基酸氧化酶的活性位点可塑性:晶体学分析
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Limited proteolysis and X-ray crystallography reveal the origin of substrate specificity and of the rate-limiting product release during oxidation of D-amino acids catalyzed by mammalian D-amino acid oxidase.有限蛋白水解和X射线晶体学揭示了哺乳动物D-氨基酸氧化酶催化D-氨基酸氧化过程中底物特异性和限速产物释放的起源。
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On the reaction of D-amino acid oxidase with -chloro-D-alanine.关于D-氨基酸氧化酶与氯-D-丙氨酸的反应。
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9
Role of the active site residues arginine-216 and arginine-237 in the substrate specificity of mammalian D-aspartate oxidase.哺乳动物 D-天冬氨酸氧化酶活性部位残基精氨酸-216 和精氨酸-237 在底物特异性中的作用。
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10
Activation of a peroxisomal Pichia pastoris D-amino acid oxidase, which uses d-alanine as a preferred substrate, depends on pyruvate carboxylase.毕赤酵母过氧化物酶体 D-氨基酸氧化酶的激活依赖于丙酮酸羧化酶,该酶以 D-丙氨酸为首选底物。
FEMS Yeast Res. 2010 Sep;10(6):708-16. doi: 10.1111/j.1567-1364.2010.00647.x. Epub 2010 May 17.

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PH-Dependent Enantioselectivity of D-amino Acid Oxidase in Aqueous Solution.在水溶液中 D-氨基酸氧化酶对映体选择性依赖 pH 值。
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