• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

去污剂稳定磷酸二酯酶 6 的构象。

Detergents stabilize the conformation of phosphodiesterase 6.

机构信息

Department of Pharmacology, School of Medicine, Case Western Reserve University, Cleveland, Ohio 44106, United States.

出版信息

Biochemistry. 2011 Nov 8;50(44):9520-31. doi: 10.1021/bi2014695. Epub 2011 Oct 14.

DOI:10.1021/bi2014695
PMID:21978030
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3215081/
Abstract

Membrane-bound phosphodiesterase 6 (PDE6) plays an important role in visual signal transduction by regulating cGMP levels in rod photoreceptor cells. Our understanding of PDE6 catalysis and structure suffers from inadequate characterization of the α and β subunit catalytic core, interactions of the core with two intrinsically disordered, proteolysis-prone inhibitory PDEγ (Pγ) subunits, and binding of two types of isoprenyl-binding protein δ, called PrBP/δ, to the isoprenylated C-termini of the catalytic core. Structural studies of native PDE6 have been also been hampered by the lack of a heterologous expression system for the holoenzyme. In this work, we purified PDE6 in the presence of PrBP/δ and screened for additives and detergents that selectively suppress PDE6 basal activity while sparing that of the trypsin-activated enzyme. Some detergents removed PrBP/δ from the PDE complex, separating it from the holoenzyme after PDE6 purification. Additionally, selected detergents also significantly reduced the level of dissociation of PDE6 subunits, increasing their homogeneity and stabilizing the holoenzyme by substituting for its native membrane environment.

摘要

膜结合型磷酸二酯酶 6(PDE6)在调节视杆细胞中 cGMP 水平方面在视觉信号转导中起着重要作用。我们对 PDE6 催化作用和结构的理解受到对 α 和 β 亚基催化核心、核心与两个固有无序、易发生蛋白水解的抑制性 PDEγ(Pγ)亚基的相互作用以及两种类型的异戊烯基结合蛋白 δ(称为 PrBP/δ)与催化核心异戊烯化 C 末端的结合的不足描述。天然 PDE6 的结构研究也受到缺乏全酶异源表达系统的阻碍。在这项工作中,我们在存在 PrBP/δ 的情况下纯化了 PDE6,并筛选了选择性抑制 PDE6 基础活性而不抑制胰蛋白酶激活酶活性的添加剂和去污剂。一些去污剂将 PrBP/δ 从 PDE 复合物中去除,在 PDE6 纯化后将其与全酶分离。此外,选定的去污剂还显著降低了 PDE6 亚基的解离水平,通过取代其天然膜环境增加了它们的同质性并稳定了全酶。

相似文献

1
Detergents stabilize the conformation of phosphodiesterase 6.去污剂稳定磷酸二酯酶 6 的构象。
Biochemistry. 2011 Nov 8;50(44):9520-31. doi: 10.1021/bi2014695. Epub 2011 Oct 14.
2
Structural characterization of the rod cGMP phosphodiesterase 6.杆状 cGMP 磷酸二酯酶 6 的结构特征。
J Mol Biol. 2010 Aug 20;401(3):363-73. doi: 10.1016/j.jmb.2010.06.044. Epub 2010 Jul 1.
3
Characterization of conformational changes and protein-protein interactions of rod photoreceptor phosphodiesterase (PDE6).视杆细胞磷酸二酯酶(PDE6)构象变化和蛋白-蛋白相互作用的表征。
J Biol Chem. 2012 Jun 8;287(24):20111-21. doi: 10.1074/jbc.M112.354647. Epub 2012 Apr 18.
4
Probing the catalytic sites and activation mechanism of photoreceptor phosphodiesterase using radiolabeled phosphodiesterase inhibitors.使用放射性标记的磷酸二酯酶抑制剂探究光感受器磷酸二酯酶的催化位点和激活机制。
J Biol Chem. 2009 Nov 13;284(46):31541-7. doi: 10.1074/jbc.M109.018606. Epub 2009 Sep 16.
5
Structural requirements of the photoreceptor phosphodiesterase gamma-subunit for inhibition of rod PDE6 holoenzyme and for its activation by transducin.视紫红质磷酸二酯酶 γ 亚基的结构要求,以抑制杆状 PDE6 全酶,并通过转导蛋白激活它。
J Biol Chem. 2010 Feb 12;285(7):4455-63. doi: 10.1074/jbc.M109.057406. Epub 2009 Nov 30.
6
Functional mapping of interacting regions of the photoreceptor phosphodiesterase (PDE6) γ-subunit with PDE6 catalytic dimer, transducin, and regulator of G-protein signaling9-1 (RGS9-1).光感受器磷酸二酯酶(PDE6)γ亚基与 PDE6 催化二聚体、转导蛋白和 G 蛋白信号转导调节因子 9-1(RGS9-1)相互作用区域的功能图谱。
J Biol Chem. 2012 Jul 27;287(31):26312-20. doi: 10.1074/jbc.M112.377333. Epub 2012 Jun 4.
7
The N termini of the inhibitory γ-subunits of phosphodiesterase-6 (PDE6) from rod and cone photoreceptors differentially regulate transducin-mediated PDE6 activation.视杆和视锥光感受器的磷酸二酯酶-6(PDE6)抑制性γ亚基的 N 端,差异调节转导蛋白介导的 PDE6 激活。
J Biol Chem. 2019 May 24;294(21):8351-8360. doi: 10.1074/jbc.RA119.007520. Epub 2019 Apr 8.
8
The molecular architecture of photoreceptor phosphodiesterase 6 (PDE6) with activated G protein elucidates the mechanism of visual excitation.光感受器磷酸二酯酶 6(PDE6)与激活的 G 蛋白的分子结构阐明了视觉激发的机制。
J Biol Chem. 2019 Dec 20;294(51):19486-19497. doi: 10.1074/jbc.RA119.011002. Epub 2019 Nov 5.
9
Allosteric Regulation of Rod Photoreceptor Phosphodiesterase 6 (PDE6) Elucidated by Chemical Cross-Linking and Quantitative Mass Spectrometry.变构调节视杆细胞磷酸二酯酶 6(PDE6)的化学交联和定量质谱研究。
J Mol Biol. 2019 Sep 6;431(19):3677-3689. doi: 10.1016/j.jmb.2019.07.035. Epub 2019 Aug 5.
10
Evaluation of the 17-kDa prenyl-binding protein as a regulatory protein for phototransduction in retinal photoreceptors.评估17-kDa异戊烯基结合蛋白作为视网膜光感受器光转导调节蛋白的作用。
J Biol Chem. 2005 Jan 14;280(2):1248-56. doi: 10.1074/jbc.M410475200. Epub 2004 Oct 25.

引用本文的文献

1
A p97/Valosin-Containing Protein Inhibitor Drug CB-5083 Has a Potent but Reversible Off-Target Effect on Phosphodiesterase-6.一种 p97/Valosin-Containing 蛋白抑制剂药物 CB-5083 对磷酸二酯酶-6 具有强大但可逆的非靶标效应。
J Pharmacol Exp Ther. 2021 Jul;378(1):31-41. doi: 10.1124/jpet.120.000486. Epub 2021 Apr 30.
2
Cryo-EM structure of phosphodiesterase 6 reveals insights into the allosteric regulation of type I phosphodiesterases.磷酸二酯酶 6 的冷冻电镜结构揭示了 I 型磷酸二酯酶的变构调节机制。
Sci Adv. 2019 Feb 27;5(2):eaav4322. doi: 10.1126/sciadv.aav4322. eCollection 2019 Feb.
3
Crystallization of proteins from crude bovine rod outer segments.从粗制牛视杆细胞外段中结晶蛋白质。
Methods Enzymol. 2015;557:439-58. doi: 10.1016/bs.mie.2014.11.045. Epub 2015 Mar 17.

本文引用的文献

1
UNC119 is required for G protein trafficking in sensory neurons.UNC119 是感觉神经元中 G 蛋白运输所必需的。
Nat Neurosci. 2011 Jun 5;14(7):874-80. doi: 10.1038/nn.2835.
2
RAS-converting enzyme 1-mediated endoproteolysis is required for trafficking of rod phosphodiesterase 6 to photoreceptor outer segments.RAS 转换酶 1 介导的内切作用对于视杆磷酸二酯酶 6 向光感受器外节的运输是必需的。
Proc Natl Acad Sci U S A. 2011 May 24;108(21):8862-6. doi: 10.1073/pnas.1103627108. Epub 2011 May 9.
3
Rod phosphodiesterase-6 PDE6A and PDE6B subunits are enzymatically equivalent.杆状视紫红质磷酸二酯酶-6(PDE6A)和 PDE6B 亚基在酶学上是等效的。
J Biol Chem. 2010 Dec 17;285(51):39828-34. doi: 10.1074/jbc.M110.170068. Epub 2010 Oct 12.
4
Structural characterization of the rod cGMP phosphodiesterase 6.杆状 cGMP 磷酸二酯酶 6 的结构特征。
J Mol Biol. 2010 Aug 20;401(3):363-73. doi: 10.1016/j.jmb.2010.06.044. Epub 2010 Jul 1.
5
Mechanism for the allosteric regulation of phosphodiesterase 2A deduced from the X-ray structure of a near full-length construct.从接近全长构建体的X射线结构推导磷酸二酯酶2A变构调节的机制。
Proc Natl Acad Sci U S A. 2009 Oct 27;106(43):18225-30. doi: 10.1073/pnas.0907635106. Epub 2009 Oct 14.
6
Structural basis of phosphodiesterase 6 inhibition by the C-terminal region of the gamma-subunit.γ亚基C末端区域对磷酸二酯酶6的抑制作用的结构基础
EMBO J. 2009 Nov 18;28(22):3613-22. doi: 10.1038/emboj.2009.284. Epub 2009 Oct 1.
7
AIPL1, a protein associated with childhood blindness, interacts with alpha-subunit of rod phosphodiesterase (PDE6) and is essential for its proper assembly.AIPL1是一种与儿童失明相关的蛋白质,它与视杆磷酸二酯酶(PDE6)的α亚基相互作用,对其正确组装至关重要。
J Biol Chem. 2009 Nov 6;284(45):30853-61. doi: 10.1074/jbc.M109.036780. Epub 2009 Sep 16.
8
Different properties of the native and reconstituted heterotrimeric G protein transducin.天然和重组异源三聚体G蛋白转导素的不同特性。
Biochemistry. 2008 Nov 25;47(47):12409-19. doi: 10.1021/bi8015444.
9
NMR of membrane-associated peptides and proteins.膜相关肽和蛋白质的核磁共振(NMR)
Curr Protein Pept Sci. 2008 Feb;9(1):50-69. doi: 10.2174/138920308783565714.
10
Intrinsically disordered gamma-subunit of cGMP phosphodiesterase encodes functionally relevant transient secondary and tertiary structure.环磷酸鸟苷磷酸二酯酶的内在无序γ亚基编码功能相关的瞬时二级和三级结构。
Proc Natl Acad Sci U S A. 2008 Feb 5;105(5):1505-10. doi: 10.1073/pnas.0709558105. Epub 2008 Jan 29.