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呼吸道合胞病毒核衣壳蛋白两种晶体形式的结构:天然螺旋形式中潜在堆积相互作用的细节

Structures of respiratory syncytial virus nucleocapsid protein from two crystal forms: details of potential packing interactions in the native helical form.

作者信息

El Omari K, Dhaliwal B, Ren J, Abrescia N G A, Lockyer M, Powell K L, Hawkins A R, Stammers D K

机构信息

Division of Structural Biology and Oxford Protein Production Facility, The Wellcome Trust Centre for Human Genetics, University of Oxford, Roosevelt Drive, Oxford OX3 7BN, England.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 Oct 1;67(Pt 10):1179-83. doi: 10.1107/S1744309111029228. Epub 2011 Sep 24.

Abstract

Respiratory syncytial virus (RSV) is a frequent cause of respiratory illness in infants, but there is currently no vaccine nor effective drug treatment against this virus. The RSV RNA genome is encapsidated and protected by a nucleocapsid protein; this RNA-nucleocapsid complex serves as a template for viral replication. Interest in the nucleocapsid protein has increased owing to its recent identification as the target site for novel anti-RSV compounds. The crystal structure of human respiratory syncytial virus nucleocapsid (HRSVN) was determined to 3.6 Å resolution from two crystal forms belonging to space groups P2(1)2(1)2(1) and P1, with one and four decameric rings per asymmetric unit, respectively. In contrast to a previous structure of HRSVN, the addition of phosphoprotein was not required to obtain diffraction-quality crystals. The HRSVN structures reported here, although similar to the recently published structure, present different molecular packing which may have some biological implications. The positions of the monomers are slightly shifted in the decamer, confirming the adaptability of the ring structure. The details of the inter-ring contacts in one crystal form revealed here suggest a basis for helical packing and that the stabilization of native HRSVN is via mainly ionic interactions.

摘要

呼吸道合胞病毒(RSV)是婴儿呼吸道疾病的常见病因,但目前尚无针对该病毒的疫苗或有效药物治疗方法。RSV RNA基因组由核衣壳蛋白包裹和保护;这种RNA-核衣壳复合物作为病毒复制的模板。由于最近发现核衣壳蛋白是新型抗RSV化合物的靶点,人们对它的兴趣有所增加。人呼吸道合胞病毒核衣壳(HRSVN)的晶体结构通过两种属于空间群P2(1)2(1)2(1)和P1的晶体形式确定,分辨率为3.6 Å,每个不对称单元分别有一个和四个十聚体环。与之前的HRSVN结构不同,获得衍射质量的晶体不需要添加磷蛋白。这里报道的HRSVN结构虽然与最近发表的结构相似,但呈现出不同的分子堆积,这可能具有一些生物学意义。十聚体中单体的位置略有偏移,证实了环结构的适应性。这里揭示的一种晶体形式中环间接触的细节为螺旋堆积提供了基础,并且天然HRSVN的稳定主要通过离子相互作用实现。

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