Red Sea Research Center, King Abdullah University of Science and Technology, 4700 KAUST, Thuwal 23955 6900, Saudi Arabia.
Mol Ecol. 2012 Jan;21(2):388-405. doi: 10.1111/j.1365-294X.2011.05378.x. Epub 2011 Dec 1.
The Red Sea is a unique marine ecosystem with contrasting gradients of temperature and salinity along its north-to-south axis. It is an extremely oligotrophic environment that is characterized by perpetual year-round water column stratification, high annual solar irradiation, and negligible riverine and precipitation inputs. In this study, we investigated whether the contemporary environmental conditions shape community assemblages by pyrosequencing 16S rRNA genes of bacteria in surface water samples collected from the northeastern half of this water body. A combined total of 1855 operational taxonomic units (OTUs) were recovered from the 'small-cell' and 'large-cell' fractions. Here, a few major OTUs affiliated with Cyanobacteria and Proteobacteria accounted for ∼93% of all sequences, whereas a tail of 'rare' OTUs represented most of the diversity. OTUs allied to Surface 1a/b SAR11 clades and Prochlorococcus related to the high-light-adapted (HL2) ecotype were the most widespread and predominant sequence types. Interestingly, the frequency of taxa that are typically found in the upper mesopelagic zone was significantly elevated in the northern transects compared with those in the central, presumably as a direct effect of deep convective mixing in the Gulf of Aqaba and water exchange with the northern Red Sea. Although temperature was the best predictor of species richness across all major lineages, both spatial and environmental distances correlated strongly with phylogenetic distances. Our results suggest that the bacterial diversity of the Red Sea is as high as in other tropical seas and provide evidence for fundamental differences in the biogeography of pelagic communities between the northern and central regions.
红海是一个独特的海洋生态系统,其温度和盐度沿着从北到南的轴形成鲜明的梯度。它是一个极其贫营养的环境,其特征是常年水柱状分层、高年度太阳辐射和可忽略不计的河流和降水输入。在这项研究中,我们通过对从该水体东北半部分采集的表层水样的细菌 16S rRNA 基因进行焦磷酸测序,研究了当代环境条件是否会影响群落组合。从小细胞和大细胞两个部分共恢复了 1855 个操作分类单元(OTU)。在这里,少数与蓝细菌和变形菌有关的主要 OTU 占所有序列的约 93%,而大多数多样性则由“稀有”OTU 组成。与 Surface 1a/b SAR11 类群相关的 OTU 和与高光适应(HL2)生态型有关的聚球藻是分布最广和主要的序列类型。有趣的是,与通常在中层上层中发现的分类群的频率在北部横截面上明显高于在中部的横截面上,这可能是由于亚喀巴湾的深层对流混合和与北部红海的水交换的直接影响。尽管温度是所有主要谱系中物种丰富度的最佳预测指标,但空间和环境距离与系统发育距离密切相关。我们的研究结果表明,红海的细菌多样性与其他热带海域一样高,并为北部和中部地区浮游群落生物地理学的基本差异提供了证据。