Schedlbauer Andreas, Gandini Rosaria, Kontaxis Georg, Paulmichl Markus, Furst Johannes, Konrat Robert
Max F. Perutz Laboratories, University of Vienna, Vienna, Austria.
Cell Physiol Biochem. 2011;28(6):1203-10. doi: 10.1159/000335852. Epub 2011 Dec 16.
ICln is a vital, ubiquitously expressed protein with roles in cell volume regulation, angiogenesis, cell morphology, activation of platelets and RNA processing. In previous work we have determined the 3D structure of the N-terminus of ICln (residues 1-159), which folds into a PH-like domain followed by an unstructured region (residues H134 - Q159) containing protein-protein interaction sites. Here we present sequence-specific resonance assignments of the C-terminus (residues Q159 - H235) of ICln by NMR, and show that this region of the protein is intrinsically unstructured. By applying (13)Cα- (13)Cβ secondary chemical shifts to detect possible preferences for secondary structure elements we show that the C-terminus of ICln adopts a preferred α-helical organization between residues E170 and E187, and exists preferentially in extended conformations (β-strands) between residues D161 to Y168 and E217 to T223.
ICln是一种至关重要且广泛表达的蛋白质,在细胞体积调节、血管生成、细胞形态、血小板激活和RNA加工中发挥作用。在之前的工作中,我们已经确定了ICln N端(第1至159位氨基酸残基)的三维结构,其折叠成一个类PH结构域,随后是一个包含蛋白质-蛋白质相互作用位点的无结构区域(第134位组氨酸至第159位谷氨酰胺)。在此,我们通过核磁共振给出了ICln C端(第159位谷氨酰胺至第235位组氨酸)的序列特异性共振归属,并表明该蛋白质区域本质上是无结构的。通过应用(13)Cα-(13)Cβ二级化学位移来检测对二级结构元件的可能偏好,我们发现ICln的C端在第170位谷氨酸和第187位谷氨酸之间呈现出优先的α-螺旋结构,并且在第161位天冬氨酸至第168位酪氨酸以及第217位谷氨酸至第223位苏氨酸之间优先以伸展构象(β-链)存在。