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量子化学定量构效关系模型区分磺胺类药物对人碳酸酐酶 I 和 II 以及牛碳酸酐酶 IV 同工酶的抑制活性。

Quantum chemical QSAR models to distinguish between inhibitory activities of sulfonamides against human carbonic anhydrases I and II and bovine IV isozymes.

机构信息

Faculty of Pharmacy, Al-Quds University, P.O. Box 20002 Jerusalem, Palestine.

出版信息

Chem Biol Drug Des. 2012 Apr;79(4):514-22. doi: 10.1111/j.1747-0285.2011.01309.x. Epub 2012 Jan 30.

DOI:10.1111/j.1747-0285.2011.01309.x
PMID:22181786
Abstract

Linear and nonlinear quantitative structure activity relationship models for predicting the inhibitory activities of sulfonamides toward different carbonic anhydrase isozymes were developed based on multilinear regression, principal component-artificial neural network and correlation ranking-principal component analysis, to identify a set of structurally based numerical descriptors. Multilinear regression was used to build linear quantitative structure activity relationship models using 53 compounds with their quantum chemical descriptors. For each type of isozyme, separate quantitative structure activity relationship models were obtained. It was found that the hydration energy plays a significant role in the binding of ligands to the CAI isozyme, whereas the presence of five-membered ring was detected as a major factor for the binding to the CAII isozyme. It was also found that the softness exhibited significant effect on the binding to CAIV isozyme. Principal component-artificial neural network and correlation ranking-principal component analysis analyses provide models with better prediction capability for the three types of the carbonic anhydrase isozyme inhibitory activity than those obtained by multilinear regression analysis. The best models, with improved prediction capability, were obtained for the hCAII isozyme activity. Models predictivity was evaluated by cross-validation, using an external test set and chance correlation test.

摘要

基于多元线性回归、主成分-人工神经网络和相关排序-主成分分析,建立了用于预测磺胺类化合物对不同碳酸酐酶同工酶抑制活性的线性和非线性定量构效关系模型,以确定一组基于结构的数值描述符。使用具有量子化学描述符的 53 种化合物,采用多元线性回归建立线性定量构效关系模型。对于每种同工酶,分别获得定量构效关系模型。结果表明,水合能在配体与 CAI 同工酶的结合中起着重要作用,而五元环的存在被检测为与 CAII 同工酶结合的主要因素。还发现,软度对与 CAIV 同工酶的结合有显著影响。主成分-人工神经网络和相关排序-主成分分析分析为三种类型的碳酸酐酶同工酶抑制活性提供了比多元线性回归分析更好的预测能力的模型。对于 hCAII 同工酶活性,获得了具有改进预测能力的最佳模型。通过交叉验证、外部测试集和机会相关测试评估了模型的预测能力。

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