Moredun Research Institute, Bush Loan, Penicuik EH26 0PZ, UK.
Parasitology. 2012 Mar;139(3):387-405. doi: 10.1017/S0031182011002010. Epub 2012 Jan 5.
The aim of this study was to elucidate transcriptional changes in the parasitic nematode Teladorsagia circumcincta upon encountering either naïve or immune ovine hosts. Pools of 100 000 exsheathed 3rd- stage T. circumcincta larvae were exposed in vitro to either an immune or naïve ovine abomasal environment, RNA was extracted from the larvae and sequenced using the Roche 454 platform. Each sample produced approximately 82 000 reads that assembled to give approximately 5500 Isotigs (contigs). The two sequence datasets were clustered together to give a total of 6969 clusters of which 18 were differentially expressed (P<0·001) between the two groups. Clusters with a predominance of reads in larvae exposed to the immune abomasal environment encoded homologues of peptidyl-glycine alpha-amidating monooxygenase, heat shock-protein 16-2 and IDA-1, a tyrosine phosphatase-like receptor protein. Clusters with a predominance of reads in the naïve environment encoded homologues of cytochrome b, EGg Laying defective family member 21 and NADH dehydrogenase subunit 5. Gene ontology analyses indicated that larvae exposed to the immune environment showed an increase in expression of genes involved in 'carbon utilization', 'response to stimulus' and 'developmental process'. These data suggest that T. circumcincta modulates gene expression in response to the immune status of the host.
本研究旨在阐明寄生性线虫围形线虫在遇到幼稚或免疫绵羊宿主时的转录变化。将 10 万条已脱鞘的第 3 期围形线虫幼虫暴露于体外的免疫或幼稚绵羊胃环境中,从幼虫中提取 RNA 并使用罗氏 454 平台进行测序。每个样本产生约 82000 个读数,组装后约有 5500 个 Isotigs(重叠群)。将两个序列数据集聚类在一起,共得到 6969 个聚类,其中 18 个在两组之间差异表达(P<0·001)。在暴露于免疫胃环境的幼虫中占主导地位的读数的聚类编码了肽基甘氨酸α-酰胺化单加氧酶、热休克蛋白 16-2 和 IDA-1(酪氨酸磷酸酶样受体蛋白)的同源物。在幼稚环境中占主导地位的读数的聚类编码了细胞色素 b、EGg 产卵缺陷家族成员 21 和 NADH 脱氢酶亚基 5 的同源物。GO 分析表明,暴露于免疫环境的幼虫中参与“碳利用”、“对刺激的反应”和“发育过程”的基因表达增加。这些数据表明,围形线虫根据宿主的免疫状态调节基因表达。